RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZRANB2O95218 330 aaKnown RBP eCLIP14.66□□□□□ -0.06
RNF4-208ENST00000507247 IL9P15248 144 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 GOT1P17174 413 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 IL4RP24394 825 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 IRAK1P51617 712 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 SGSHP51688 502 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 VCPP55072 806 aaKnown RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 AMPD2Q01433 879 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 NRG1Q02297 640 aaPredicted RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 MTA1Q13330 715 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 KRT81Q14533 505 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 PDK2Q15119 407 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 LLGL1Q15334 1064 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 ADGRF1Q5T601 910 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 PTCRAQ6ISU1 281 aaPredicted RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 FBXL22Q6P050 247 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 SPOCD1Q6ZMY3 1216 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 RCOR2Q8IZ40 523 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 TDRD5Q8NAT2 981 aaKnown RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 BPIFB1Q8TDL5 484 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 ASIC4Q96FT7 647 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 P2RY11Q96G91 374 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 C1orf74Q96LT6 269 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 PRICKLE1Q96MT3 831 aaPredicted RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 OSBPL9Q96SU4 736 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 HERPUD2Q9BSE4 406 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 RPP25Q9BUL9 199 aaKnown RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 LINC00597Q9H2U6 94 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 CWC15Q9P013 229 aaKnown RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 VANGL2Q9ULK5 521 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 ZNF510Q9Y2H8 683 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 WNT6Q9Y6F9 365 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 EEF2KO00418 725 aaKnown RBP14.65□□□□□ -0.06
RNF4-208ENST00000507247 SRGAP2O75044 1071 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 TUBB4AP04350 444 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 HOXC13P31276 330 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 CDKN2BP42772 138 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 HTR4Q13639 388 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 TAZQ16635 292 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 CCDC50Q8IVM0 306 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 LGI2Q8N0V4 545 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 CPXM2Q8N436 756 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 COG1Q8WTW3 980 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 ZNF592Q92610 1267 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 IGSF8Q969P0 613 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 ELSPBP1Q96BH3 223 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 FAF2Q96CS3 445 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 RBM41Q96IZ5 413 aaKnown RBP14.65□□□□□ -0.06
RNF4-208ENST00000507247 CSPG4P5Q96PW8 444 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 ZNF670Q9BS34 389 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 CALN1Q9BXU9 219 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 CARD9Q9H257 536 aa14.65□□□□□ -0.06
RNF4-208ENST00000507247 IGLV3-10A0A075B6K4 115 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 hCG_1818297A0A087WSY0 165 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 ANHXE9PGG2 379 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 F5H5T6 163 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 H3BRJ5 948 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 ZNF185O15231 689 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 TSPAN3O60637 253 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 ECI2O75521 394 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 KRT10P13645 584 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 ARL4AP40617 200 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 TPI1P60174 286 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 ADCY2Q08462 1091 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 DPYSQ14117 519 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 GRM2Q14416 872 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 C5orf22Q49AR2 442 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 ANKRD20A8PQ5CZ79 823 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 TJAP1Q5JTD0 557 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 SEL1L2Q5TEA6 688 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 RFX8Q6ZV50 586 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 CIR1Q86X95 450 aaPredicted RBP14.64□□□□□ -0.07
RNF4-208ENST00000507247 VSIG1Q86XK7 387 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 MAP7D3Q8IWC1 876 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 MFSD6LQ8IWD5 586 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 PCDH19Q8TAB3 1148 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 RSAD2Q8WXG1 361 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 E2F7Q96AV8 911 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 TBC1D31Q96DN5 1066 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 ZFYVE19Q96K21 471 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 RPGRIP1Q96KN7 1286 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 EPAS1Q99814 870 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 MPP6Q9NZW5 540 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 RCOR3Q9P2K3 495 aaPredicted RBP14.64□□□□□ -0.07
RNF4-208ENST00000507247 TBC1D14Q9P2M4 693 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 MFHAS1Q9Y4C4 1052 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 NUMBLQ9Y6R0 609 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 CUL9Q8IWT3 2517 aa14.64□□□□□ -0.07
RNF4-208ENST00000507247 TICRRQ7Z2Z1 1910 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 DRGXA6NNA5 263 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 ZNF487B1APH4 448 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 CNTN5O94779 1100 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 PRLRP16471 622 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 TCP1P17987 556 aaKnown RBP14.63□□□□□ -0.07
RNF4-208ENST00000507247 AMPD1P23109 780 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 EPHB2P29323 1055 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 PTPN7P35236 360 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 CHKAP35790 457 aa14.63□□□□□ -0.07
RNF4-208ENST00000507247 HCAR3P49019 387 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms