RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 DENND1AQ8TEH3 1009 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 TRAPPC12Q8WVT3 735 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 LRTOMTQ8WZ04 291 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 KIAA1191Q96A73 305 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 TBC1D20Q96BZ9 403 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 REPS1Q96D71 796 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 LTV1Q96GA3 475 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 MRGPRX1Q96LB2 322 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 ASB2Q96Q27 587 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 PRAM1Q96QH2 718 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 TTLL2Q9BWV7 592 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 APOL5Q9BWW9 433 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 CIPCQ9C0C6 399 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 GBA2Q9HCG7 927 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 STARD7Q9NQZ5 370 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 SH3GLB2Q9NR46 395 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 PDGFCQ9NRA1 345 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 HELLSQ9NRZ9 838 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 SACM1LQ9NTJ5 587 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 CDC23Q9UJX2 597 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 SH2B3Q9UQQ2 575 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 SETD1BQ9UPS6 1966 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 SLIT1O75093 1534 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZNF804BA4D1E1 1349 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 ANKRD18BA2A2Z9 1011 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 RHPN2P1A8MT19 583 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 FOXN3O00409 490 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 AREL1O15033 823 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 ADAMTS3O15072 1205 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 FYB1O15117 783 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 BCAR3O75815 825 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 BMP15O95972 392 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 CSTBP04080 98 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 DHRS4L1P0CG22 281 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 NPR1P16066 1061 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 RPL17P18621 184 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 FPR3P25089 353 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 PRKAR1BP31321 381 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 ELF1P32519 619 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 TMPOP42166 694 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 PIK3CBP42338 1070 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 TECP42680 631 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 RAD52P43351 418 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 AGFG1P52594 562 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 E2F1Q01094 437 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 RAB32Q13637 225 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZIK1Q3SY52 487 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 ANO6Q4KMQ2 910 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 SLC9A4Q6AI14 798 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 PGBD2Q6P3X8 592 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 ATF7IPQ6VMQ6 1270 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 RP9Q8TA86 221 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 TMEM41AQ96HV5 264 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 PLEKHF1Q96S99 279 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 NUDT16L1Q9BRJ7 211 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 C17orf80Q9BSJ5 609 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 TMEM120AQ9BXJ8 343 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 FSD1LQ9BXM9 530 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 AP1M1Q9BXS5 423 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 STK31Q9BXU1 1019 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 ATP6V0A4Q9HBG4 840 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 MED16Q9Y2X0 877 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 SNX14Q9Y5W7 946 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 FER1L4A9Z1Z3 1794 aa4.8□□□□□ -1.64
CALCOCO2-208ENST00000506971 FNDC1Q4ZHG4 1894 aaPredicted RBP4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 TNRQ92752 1358 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 TMEM2Q9UHN6 1383 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PLEKHG1Q9ULL1 1385 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 KAT6BQ8WYB5 2073 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 SOS1Q07889 1333 aaPredicted RBP4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 TTC21BQ7Z4L5 1316 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PHGDHO43175 533 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PLOD3O60568 738 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 TGFB3P10600 412 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 CTGFP29279 349 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 KRT9P35527 623 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 STT3AP46977 705 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PLCD1P51178 756 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 DGKEP52429 567 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 ARL4CP56559 192 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZBED6P86452 979 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 CNN3Q15417 329 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 TAF12Q16514 161 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 NPNTQ6UXI9 565 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 DSTYKQ6XUX3 929 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 NEK8Q86SG6 692 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 ABRAQ8N0Z2 381 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 SIRT6Q8N6T7 355 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZNF366Q8N895 744 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 TERB1Q8NA31 727 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PRSS3P2Q8NHM4 247 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 FRAT1Q92837 279 aaPredicted RBP4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PHKBQ93100 1093 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 CDK19Q9BWU1 502 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 NKIRAS2Q9NYR9 191 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 KLHL13Q9P2N7 655 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms