RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	GAD2	Q05329	585 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	SLC18A3	Q16572	532 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	C5orf22	Q49AR2	442 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	RAB6C	Q53S08	254 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	MPP7	Q5T2T1	576 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	SH3PXD2A	Q5TCZ1	1133 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	PIK3R6	Q5UE93	754 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	NAIF1	Q69YI7	327 aa	Predicted RBP	11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	ZC3H14	Q6PJT7	736 aa	Known RBP	11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	PHLDB2	Q86SQ0	1253 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	EMC1	Q8N766	993 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	PJA1	Q8NG27	643 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	RXFP2	Q8WXD0	754 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	BTN2A3P	Q96KV6	586 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	RAB6C	Q9H0N0	254 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	ANLN	Q9NQW6	1124 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	PIGV	Q9NUD9	493 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	ARHGEF38	Q9NXL2	777 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	XPO7	Q9UIA9	1087 aa	Known RBP	11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	MRPS17	Q9Y2R5	130 aa	Known RBP	11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	SIT1	Q9Y3P8	196 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	ZNF462	Q96JM2	2506 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	AKAP13	Q12802	2813 aa		11.12	□□□□□ -0.63
APBB3-209	ENST00000504872	TICRR	Q7Z2Z1	1910 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	GOLGA6L7	A0A1B0GV03	622 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	FAM170A	A1A519	330 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	CACNG3	O60359	315 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	GDF9	O60383	454 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	LCA5L	O95447	670 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	GJB6	O95452	261 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	ADCY5	O95622	1261 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	CYP1A2	P05177	515 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	ADH5	P11766	374 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	CCR1	P32246	355 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	ZNF143	P52747	638 aa	Predicted RBP	11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	OGDH	Q02218	1023 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	MTA1	Q13330	715 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	GAS6	Q14393	721 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	BRMS1L	Q5PSV4	323 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	FSTL4	Q6MZW2	842 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	STRADA	Q7RTN6	431 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	C12orf40	Q86WS4	652 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	ZNF683	Q8IZ20	524 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	SYNPO	Q8N3V7	929 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	ARFGAP1	Q8N6T3	406 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	GPR161	Q8N6U8	529 aa	Known RBP	11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	CD101	Q93033	1021 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	TMA16	Q96EY4	203 aa	Known RBP	11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	MYEOV	Q96EZ4	313 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	LMLN	Q96KR4	655 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	C1orf74	Q96LT6	269 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	CFAP57	Q96MR6	1250 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	PANX2	Q96RD6	677 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	FOXQ1	Q9C009	403 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	METTL5	Q9NRN9	209 aa	Known RBP	11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	PARVA	Q9NVD7	372 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	DDIT4	Q9NX09	232 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	STAP1	Q9ULZ2	295 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	SLC27A6	Q9Y2P4	619 aa		11.11	□□□□□ -0.63
APBB3-209	ENST00000504872	TENM4	Q6N022	2769 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	ANKRD62	A6NC57	917 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	DRGX	A6NNA5	263 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	TMCO5B	A8MYB1	307 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872		K7EQS6	105 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	TULP3	O75386	442 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	ADH1C	P00326	375 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	DCN	P07585	359 aa	Known RBP	11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	MYBL1	P10243	752 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	TYR	P14679	529 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	DRD1	P21728	446 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	ADRA1B	P35368	520 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	SLC11A2	P49281	568 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	GALC	P54803	685 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	HDAC4	P56524	1084 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	PON2	Q15165	354 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	MPPE1	Q53F39	396 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	TDRD12	Q587J7	1177 aa	Known RBP	11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	MS4A13	Q5J8X5	152 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	DGKK	Q5KSL6	1271 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	CCDC122	Q5T0U0	273 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	TPGS1	Q6ZTW0	290 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	VPS36	Q86VN1	386 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	TTC16	Q8NEE8	873 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	FNIP1	Q8TF40	1166 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	PNKP	Q96T60	521 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	P2RY13	Q9BPV8	354 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	SLC2A11	Q9BYW1	496 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	WDCP	Q9H6R7	721 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	LMAN1L	Q9HAT1	526 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	SEPT11	Q9NVA2	429 aa	Known RBP	11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	IMPACT	Q9P2X3	320 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	HCN2	Q9UL51	889 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	CLEC4E	Q9ULY5	219 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	STARD13	Q9Y3M8	1113 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	MYOF	Q9NZM1	2061 aa		11.1	□□□□□ -0.63
APBB3-209	ENST00000504872	TEP1	Q99973	2627 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms