RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 CORO1AP31146 461 aaKnown RBP13.11□□□□□ -0.31
LSM6-204ENST00000504181 DDIT3P35638 169 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 CASRP41180 1078 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 PPP2CBP62714 309 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 PPP2CAP67775 309 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 C10orf120Q5SQS8 335 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 DTHD1Q6ZMT9 781 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 WDR36Q8NI36 951 aaKnown RBP13.11□□□□□ -0.31
LSM6-204ENST00000504181 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 OMDQ99983 421 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 SLC2A11Q9BYW1 496 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
LSM6-204ENST00000504181 NMUR1Q9HB89 426 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 KRT82Q9NSB4 513 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 INTS13Q9NVM9 706 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 ZNF510Q9Y2H8 683 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 C10orf142B7Z368 130 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 MAGEC1O60732 1142 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 RTN2O75298 545 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 TBCAO75347 108 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 AP1G2O75843 785 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 BEST1O76090 585 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 PRPF6O94906 941 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 REC8O95072 547 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 LDHAP00338 332 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 TNNC2P02585 160 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 ALPPL2P10696 532 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 HLA-FP30511 346 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 KCNA1Q09470 495 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 CST6Q15828 149 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 CRTC1Q6UUV9 634 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 RBM44Q6ZP01 1051 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 VASH2Q86V25 355 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 ZC3H3Q8IXZ2 948 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 ZMIZ2Q8NF64 920 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 OR14C36Q8NHC7 312 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 HTR3CQ8WXA8 447 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 FUCA2Q9BTY2 467 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 FBXO44Q9H4M3 255 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 AGO1Q9UL18 857 aaKnown RBP13.1□□□□□ -0.31
LSM6-204ENST00000504181 CELSR1Q9NYQ6 3014 aa13.1□□□□□ -0.31
LSM6-204ENST00000504181 A0A1W2PQH9 124 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 RNASEH1O60930 286 aaKnown RBP13.09□□□□□ -0.31
LSM6-204ENST00000504181 MAT2AP31153 395 aaKnown RBP13.09□□□□□ -0.31
LSM6-204ENST00000504181 SLC5A2P31639 672 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 PRPHP41219 470 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 ADPRHP54922 357 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 ME3Q16798 604 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 ZNF787Q6DD87 383 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 GPRIN1Q7Z2K8 1008 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 C14orf80Q86SX3 495 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 ADIPOR2Q86V24 386 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 IQCHQ86VS3 1027 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
LSM6-204ENST00000504181 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 ZSCAN1Q8NBB4 408 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 SMOQ99835 787 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 TMPRSS4Q9NRS4 437 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 ABCB8Q9NUT2 735 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
LSM6-204ENST00000504181 RASAL2Q9UJF2 1139 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 CA5BQ9Y2D0 317 aa13.09□□□□□ -0.31
LSM6-204ENST00000504181 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 CCDC187A0A096LP49 1063 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 CPED1A4D0V7 1026 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 SIN3BO75182 1162 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
LSM6-204ENST00000504181 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
LSM6-204ENST00000504181 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
LSM6-204ENST00000504181 MAP3K7CLP57077 242 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TNNC1P63316 161 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 CDKN3Q16667 212 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 MANEAQ5SRI9 462 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 MBLAC2Q68D91 279 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 KLHDC10Q6PID8 442 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms