RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 PRMT1Q99873 361 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 KLF16Q9BXK1 252 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 FRMD8P1Q9BZ68 369 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 ADAM7Q9H2U9 754 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 NKX2-4Q9H2Z4 354 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 CERS4Q9HA82 394 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 USP29Q9HBJ7 922 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 HOMER3Q9NSC5 361 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 OLA1Q9NTK5 396 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 NDFIP2Q9NV92 336 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 HCFC1R1Q9NWW0 138 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 ZNF212Q9UDV6 495 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 OR12D3Q9UGF7 316 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 NFU1Q9UMS0 254 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 HEY1Q9Y5J3 304 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 NR2E3Q9Y5X4 410 aa7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 MYO18AQ92614 2054 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 KIF26AQ9ULI4 1882 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-203ENST00000503464 MYLKQ15746 1914 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 IGLV3-10A0A075B6K4 115 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 GOLGA6L7A0A1B0GV03 622 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 BCLAF3A2AJT9 711 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 E9PAM4 449 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 CCL16O15467 120 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 LPXNO60711 386 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 MOSPD3O75425 235 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 RFPL2O75678 378 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 STC2O76061 302 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 MOCS2O96007 188 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 GLUD1P00367 558 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 KRT14P02533 472 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 KLKB1P03952 638 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 TUBBP07437 444 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 HMBSP08397 361 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 RBL1P28749 1068 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 SLC6A4P31645 630 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 ELF1P32519 619 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 RPL22P35268 128 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 ARL4AP40617 200 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 VPS41P49754 854 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 EPHB3P54753 998 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 MLLT6P55198 1093 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 CYP4F8P98187 520 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 RING1Q06587 406 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 GPM6BQ13491 265 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 CUL1Q13616 776 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 VEPH1Q14D04 833 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 PRKD1Q15139 912 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 ARL13BQ3SXY8 428 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 FAM133BQ5BKY9 247 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 HECTD3Q5T447 861 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 STXBP5Q5T5C0 1151 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 UBAP2Q5T6F2 1119 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 AFMIDQ63HM1 303 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 CCDC70Q6NSX1 233 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 CCDC149Q6ZUS6 474 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 SYDE1Q6ZW31 735 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 NLRP14Q86W24 1093 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 ARHGAP12Q8IWW6 846 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 EIF1ADQ8N9N8 165 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 FAM71DQ8N9W8 422 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 TTC13Q8NBP0 860 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 TSEN2Q8NCE0 465 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 VN1R2Q8NFZ6 395 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 FBXO25Q8TCJ0 367 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 GRK7Q8WTQ7 553 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 GDPD5Q8WTR4 605 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 IFT81Q8WYA0 676 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 P3H4Q92791 437 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 ART4Q93070 314 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 CAVIN3Q969G5 261 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 RNF34Q969K3 372 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 IGSF8Q969P0 613 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 RTP4Q96DX8 246 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 P2RY11Q96G91 374 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 SAMD11Q96NU1 681 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 CYP2S1Q96SQ9 504 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 EPAS1Q99814 870 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 EMILIN2Q9BXX0 1053 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 MAK16Q9BXY0 300 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 FUT8Q9BYC5 575 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 TXLNGYQ9BZA5 131 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 SIK2Q9H0K1 926 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 RAB17Q9H0T7 212 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 NOL6Q9H6R4 1146 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 PCDH9Q9HC56 1237 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 MAN1C1Q9NR34 630 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 GKN1Q9NS71 199 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 TRPM5Q9NZQ8 1165 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 DNMT3LQ9UJW3 386 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 ZNF148Q9UQR1 794 aa7.12□□□□□ -1.27
TOPBP1-203ENST00000503464 DENND4AQ7Z401 1863 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 REV3LO60673 3130 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 SGK1O00141 431 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 RFXAPO00287 272 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 GFRA2O00451 464 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PER2O15055 1255 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 MCF2LO15068 1137 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms