RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 MED7O43513 233 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 TOP3BO95985 862 aaKnown RBP16.87■□□□□ 0.29
SCLT1-204ENST00000503215 HOXD12P35452 270 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 MPP7Q5T2T1 576 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 RGL4Q8IZJ4 473 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 PRCCQ92733 491 aaPredicted RBP16.87■□□□□ 0.29
SCLT1-204ENST00000503215 SERPINB11Q96P15 392 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 PRSS16Q9NQE7 514 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 PLA2G4CQ9UP65 541 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 SLCO1B1Q9Y6L6 691 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 CACNA1BQ00975 2339 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 FAM170AA1A519 330 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 TRUB2O95900 331 aaKnown RBP16.86■□□□□ 0.29
SCLT1-204ENST00000503215 IGLV3-25P01717 112 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 DLDP09622 509 aaKnown RBP16.86■□□□□ 0.29
SCLT1-204ENST00000503215 NUMBP49757 651 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 YWHAZP63104 245 aaKnown RBP16.86■□□□□ 0.29
SCLT1-204ENST00000503215 GFPT1Q06210 699 aaPredicted RBP16.86■□□□□ 0.29
SCLT1-204ENST00000503215 DCAF6Q58WW2 860 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 MS4A13Q5J8X5 152 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 MIIPQ5JXC2 388 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 MFN1Q8IWA4 741 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 AHI1Q8N157 1196 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 CARNMT1Q8N4J0 409 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 HJURPQ8NCD3 748 aaPredicted RBP16.86■□□□□ 0.29
SCLT1-204ENST00000503215 OR2T3Q8NH03 318 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 FIBINQ8TAL6 211 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 CEP76Q8TAP6 659 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 MYO19Q96H55 970 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 THAP9Q9H5L6 903 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 PLCB1Q9NQ66 1216 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 DNAJC12Q9UKB3 198 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 KNL1Q8NG31 2342 aa16.86■□□□□ 0.29
SCLT1-204ENST00000503215 GTPBP10A4D1E9 387 aaKnown RBP16.85■□□□□ 0.29
SCLT1-204ENST00000503215 ARHGAP33O14559 1287 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 CAPN9O14815 690 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 IRAK2O43187 625 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 SART1O43290 800 aaKnown RBP16.85■□□□□ 0.29
SCLT1-204ENST00000503215 GRAP2O75791 330 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 IGLV3-19P01714 112 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 SPINK2P20155 84 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 CSRP1P21291 193 aaKnown RBP16.85■□□□□ 0.29
SCLT1-204ENST00000503215 CLCN1P35523 988 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 CSKP41240 450 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 DPP6P42658 865 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 CTSOP43234 321 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-204ENST00000503215 RPS14P62263 151 aaKnown RBP16.85■□□□□ 0.29
SCLT1-204ENST00000503215 ZNF252P-AS1Q0IIN9 211 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 NNTQ13423 1086 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 EIF4EBP2Q13542 120 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-204ENST00000503215 MEA1Q16626 185 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 RAP1GAP2Q684P5 730 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 BEND5Q7L4P6 421 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 SLC47A2Q86VL8 602 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 LGI2Q8N0V4 545 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 DEFB106AQ8N104 65 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 MINDY1Q8N5J2 469 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 DNASE2BQ8WZ79 361 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 POPDC2Q9HBU9 364 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 ANGPTL2Q9UKU9 493 aa16.85■□□□□ 0.29
SCLT1-204ENST00000503215 MUC22E2RYF6 1773 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-204ENST00000503215 SYNJ2BP-COX16A0A087WUM0 186 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 METTL12A8MUP2 240 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 ERBB2P04626 1255 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 POLR2EP19388 210 aaKnown RBP16.84■□□□□ 0.29
SCLT1-204ENST00000503215 ACSL1P33121 698 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 FAM193AP78312 1265 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 KCNMA1Q12791 1236 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 SEMA3BQ13214 749 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 MAN2A1Q16706 1144 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-204ENST00000503215 PLEKHG6Q3KR16 790 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 SYCP2LQ5T4T6 812 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 DCAF12L1Q5VU92 463 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 PIP4P1Q86T03 277 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
SCLT1-204ENST00000503215 FOXJ1Q92949 421 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 TTC17Q96AE7 1141 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 PPP1R13BQ96KQ4 1090 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 MRGPRX3Q96LB0 322 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 NUP58Q9BVL2 599 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 MIR1-1HGQ9H1L0 117 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 LHX5Q9H2C1 402 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-204ENST00000503215 SAMSN1Q9NSI8 373 aaKnown RBP16.84■□□□□ 0.29
SCLT1-204ENST00000503215 COX16Q9P0S2 106 aa16.84■□□□□ 0.29
SCLT1-204ENST00000503215 SPAARA0A1B0GVQ0 90 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 MEI4A8MW99 385 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 ATP5BP06576 529 aaKnown RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 ACADMP11310 421 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 CEACAM1P13688 526 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 CD59P13987 128 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 TACR2P21452 398 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 OXTRP30559 389 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 ATXN3P54252 364 aaPredicted RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 SHC2P98077 582 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 BNC1Q01954 994 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 VWA3BQ502W6 1294 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 FAM183BPQ6ZVS7 135 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms