RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ITGB8P26012 769 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 AP1B1Q10567 949 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 LONRF1Q17RB8 773 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 KIAA1841Q6NSI8 718 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 CMTR2Q8IYT2 770 aaKnown RBP22.67■■□□□ 1.22
PTPN13-205ENST00000502971 CCNYQ8ND76 341 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 MCUQ8NE86 351 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 PYROXD1Q8WU10 500 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 P2RY11Q96G91 374 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 VN1R3Q9BXE9 311 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 CAPS2Q9BXY5 557 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 RC3H2Q9HBD1 1191 aaKnown RBP22.67■■□□□ 1.22
PTPN13-205ENST00000502971 SNX10Q9Y5X0 201 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.67■■□□□ 1.22
PTPN13-205ENST00000502971 WDR27A2RRH5 827 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 MSI1O43347 362 aaKnown RBP22.66■■□□□ 1.22
PTPN13-205ENST00000502971 OPHN1O60890 802 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 PAGE1O75459 146 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 SOAT2O75908 522 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 SOD2P04179 222 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 CSF2RAP15509 400 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 TPSB2P20231 275 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 ATP5DP30049 168 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 FDFT1P37268 417 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 SLCO1A2P46721 670 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 TUFMP49411 452 aaKnown RBP22.66■■□□□ 1.22
PTPN13-205ENST00000502971 PPP2R2AP63151 447 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 NRG1Q02297 640 aaPredicted RBP22.66■■□□□ 1.22
PTPN13-205ENST00000502971 TPSAB1Q15661 275 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 SKIDA1Q1XH10 827 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 MSS51Q4VC12 460 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 ANKRD20A2Q5SQ80 823 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 ANKRD20A1Q5TYW2 823 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 ANKRD20A3Q5VUR7 823 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 CCDC13Q8IYE1 715 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 GPR152Q8TDT2 470 aa22.66■■□□□ 1.22
PTPN13-205ENST00000502971 E7EVH7 732 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 METTL18O95568 372 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 HOXC13P31276 330 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 HPDP32754 393 aaPredicted RBP22.65■■□□□ 1.22
PTPN13-205ENST00000502971 PHBP35232 272 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 TAF10Q12962 218 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 SLC39A11Q8N1S5 342 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 ATP11CQ8NB49 1132 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 SLC39A13Q96H72 371 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 VPS37BQ9H9H4 285 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 PPCSQ9HAB8 311 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 HSFX1Q9UBD0 423 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 NUDT5Q9UKK9 219 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 FGF10O15520 208 aaPredicted RBP22.65■■□□□ 1.22
PTPN13-205ENST00000502971 LAG3P18627 525 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 OR1D2P34982 312 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 ATP1A2P50993 1020 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 WDR5P61964 334 aaKnown RBP22.65■■□□□ 1.22
PTPN13-205ENST00000502971 DEFB103AP81534 67 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 GALNT2Q10471 571 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 SEMA5AQ13591 1074 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 BBS9Q3SYG4 887 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 CCDC38Q502W7 563 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 HP1BP3Q5SSJ5 553 aaPredicted RBP22.65■■□□□ 1.22
PTPN13-205ENST00000502971 ANKMY2Q8IV38 441 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 RIBC1Q8N443 379 aaPredicted RBP22.65■■□□□ 1.22
PTPN13-205ENST00000502971 HDAC11Q96DB2 347 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 FCRL2Q96LA5 508 aaPredicted RBP22.65■■□□□ 1.22
PTPN13-205ENST00000502971 C1orf74Q96LT6 269 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 HERC2P3Q9BVR0 1158 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 SIK2Q9H0K1 926 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 CATSPERBQ9H7T0 1116 aa22.65■■□□□ 1.22
PTPN13-205ENST00000502971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.65■■□□□ 1.22
PTPN13-205ENST00000502971 ZNF638Q14966 1978 aaKnown RBP22.64■■□□□ 1.22
PTPN13-205ENST00000502971 SLC38A8A6NNN8 435 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 RNF103O00237 685 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 ADAM12O43184 909 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 MTSS1O43312 755 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 BAIAP3O94812 1187 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 APRTP07741 180 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 TBX4P57082 545 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 PPIDQ08752 370 aaKnown RBP22.64■■□□□ 1.21
PTPN13-205ENST00000502971 FAXCQ5TGI0 409 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 MANEALQ5VSG8 457 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 NPWQ8N729 165 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 FBXO36Q8NEA4 188 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 TBC1D31Q96DN5 1066 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 TMEM169Q96HH4 297 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 TTLL2Q9BWV7 592 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 CNOT10Q9H9A5 744 aaKnown RBP22.64■■□□□ 1.21
PTPN13-205ENST00000502971 AFF4Q9UHB7 1163 aaKnown RBP22.64■■□□□ 1.21
PTPN13-205ENST00000502971 LGALS13Q9UHV8 139 aa22.64■■□□□ 1.21
PTPN13-205ENST00000502971 CDH16O75309 829 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 BANF1O75531 89 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 ZDHHC11BP0C7U3 371 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 SRGAP2BP0DMP2 458 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 ATP2A2P16615 1042 aaKnown RBP22.63■■□□□ 1.21
PTPN13-205ENST00000502971 CDK16Q00536 496 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 DSG1Q02413 1049 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 PPIGQ13427 754 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTPN13-205ENST00000502971 BTG3Q14201 252 aaPredicted RBP22.63■■□□□ 1.21
PTPN13-205ENST00000502971 RWDD4Q6NW29 188 aaKnown RBP22.63■■□□□ 1.21
PTPN13-205ENST00000502971 PALM2Q8IXS6 379 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 IL23AQ9NPF7 189 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms