RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 CARSP49589 748 aaKnown RBP9.36□□□□□ -0.91
NR1I3-216ENST00000502848 HARS2P49590 506 aaKnown RBP9.36□□□□□ -0.91
NR1I3-216ENST00000502848 RABGGTBP53611 331 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 DYNLT1P63172 113 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 CDK16Q00536 496 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 MMRN1Q13201 1228 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 SLMAPQ14BN4 828 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 PRKD1Q15139 912 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-216ENST00000502848 TTC39BQ5VTQ0 682 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-216ENST00000502848 SDHAF4Q5VUM1 108 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 DDX42Q86XP3 938 aaKnown RBP eCLIP9.36□□□□□ -0.91
NR1I3-216ENST00000502848 ADAM32Q8TC27 787 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 GIPC2Q8TF65 315 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 HDAC11Q96DB2 347 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 TSGA13Q96PP4 275 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 TRIM51Q9BSJ1 452 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 PAK5Q9P286 719 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 ZNF510Q9Y2H8 683 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 SYNJ2BP-COX16A0A087WUM0 186 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 DRGXA6NNA5 263 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 E9PAM4 449 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 I6L893 689 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 SGK1O00141 431 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 DNALI1O14645 258 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 MAP2K7O14733 419 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 EIF3HO15372 352 aaKnown RBP eCLIP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 COCHO43405 550 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 CREB3O43889 395 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 OPHN1O60890 802 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 GCATO75600 419 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 ZMYND10O75800 440 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 CA3P07451 260 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 RHOQP17081 205 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 HSPA9P38646 679 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 ADCY8P40145 1251 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 RPL21P46778 160 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 KCNJ1P48048 391 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 MAPKAPK2P49137 400 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PGFP49763 221 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 NDST2P52849 883 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 ERVFC1P60507 584 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 SLC7A9P82251 487 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PPIDQ08752 370 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 GALNT2Q10471 571 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 EFEMP1Q12805 493 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 SNX1Q13596 522 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 HLTFQ14527 1009 aaKnown RBP eCLIP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 SHHQ15465 462 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PPM1LQ5SGD2 360 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 C9orf50Q5SZB4 431 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 HEATR6Q6AI08 1181 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 DARS2Q6PI48 645 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 RHBDF2Q6PJF5 856 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PPP1R21Q6ZMI0 780 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 TMC8Q8IU68 726 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 ZNF683Q8IZ20 524 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 CNPY4Q8N129 248 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 UMODL1-AS1Q8N2C9 162 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PYROXD2Q8N2H3 581 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 RTL3Q8N8U3 475 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 GPR152Q8TDT2 470 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 SLC22A17Q8WUG5 538 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 TFB1MQ8WVM0 346 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 AUTS2Q8WXX7 1259 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 MRPS31Q92665 395 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PRMT1Q99873 361 aaKnown RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 C17orf80Q9BSJ5 609 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 TMEM121Q9BTD3 319 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 LRRC3Q9BY71 257 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 ZYG11BQ9C0D3 744 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 EPC1Q9H2F5 836 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 USP29Q9HBJ7 922 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 TMEM248Q9NWD8 314 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 COX16Q9P0S2 106 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 SFMBT1Q9UHJ3 866 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 MSRAQ9UJ68 235 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 NFU1Q9UMS0 254 aa9.35□□□□□ -0.91
NR1I3-216ENST00000502848 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-216ENST00000502848 PLXNA4Q9HCM2 1894 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 CXorf51AA0A1B0GTR3 108 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 SLC12A8A0AV02 714 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 ESYT3A0FGR9 886 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 ZSCAN5CA6NGD5 496 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-216ENST00000502848 FAM72CH0Y354 149 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 H7C0C1 242 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 MSI1O43347 362 aaKnown RBP9.34□□□□□ -0.91
NR1I3-216ENST00000502848 MFSD11O43934 449 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 PPFIA2O75334 1257 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 MYBL2P10244 700 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 TCF3P15923 654 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 AMPD1P23109 780 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 DNAJB1P25685 340 aa9.34□□□□□ -0.91
NR1I3-216ENST00000502848 WEE1P30291 646 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms