RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 MIPEPQ99797 713 aa17.04■□□□□ 0.32
VCAN-204ENST00000502527 KATNAL1Q9BW62 490 aa17.04■□□□□ 0.32
VCAN-204ENST00000502527 CADM1Q9BY67 442 aaKnown RBP17.04■□□□□ 0.32
VCAN-204ENST00000502527 WWP1Q9H0M0 922 aa17.04■□□□□ 0.32
VCAN-204ENST00000502527 PIGVQ9NUD9 493 aa17.04■□□□□ 0.32
VCAN-204ENST00000502527 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
VCAN-204ENST00000502527 CCDC195A0A1B0GUA6 201 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 C2orf71A6NGG8 1288 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 CAPN9O14815 690 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 SNNO75324 88 aaPredicted RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 LMNAP02545 664 aaKnown RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 PSMB4P28070 264 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 ADRA1BP35368 520 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 MAP3K7CLP57077 242 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 STX3Q13277 289 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 CRYMQ14894 314 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 ARID3BQ8IVW6 561 aaPredicted RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 UNC5BQ8IZJ1 945 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 ZNF567Q8N184 647 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 NTAN1Q96AB6 310 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 PGBD4Q96DM1 585 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 ANKRD27Q96NW4 1050 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 DENND2DQ9H6A0 471 aaPredicted RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 KRT82Q9NSB4 513 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 SLC38A7Q9NVC3 462 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 DCLK1O15075 740 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 ATP5BP06576 529 aaKnown RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 GM2AP17900 193 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 BSPRYQ5W0U4 402 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 ENDOVQ8N8Q3 282 aaKnown RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 SLC7A14Q8TBB6 771 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 PRR11Q96HE9 360 aaPredicted RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 CEP41Q9BYV8 373 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 THAP1Q9NVV9 213 aa17.03■□□□□ 0.32
VCAN-204ENST00000502527 DDX43Q9NXZ2 648 aaKnown RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 NKX1-2Q9UD57 310 aaPredicted RBP17.03■□□□□ 0.32
VCAN-204ENST00000502527 GSC2O15499 205 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 GLRA3O75311 464 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 POLBP06746 335 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 SCAPQ12770 1279 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 CES4AQ5XG92 561 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 HFE2Q6ZVN8 426 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 PID1Q7Z2X4 250 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 TMEM86AQ8N2M4 240 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 NETO2Q8NC67 525 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 ZFP42Q96MM3 310 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 ULBP1Q9BZM6 244 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 NMUR2Q9GZQ4 415 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
VCAN-204ENST00000502527 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.02■□□□□ 0.32
VCAN-204ENST00000502527 SYBUQ9NX95 663 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 FLRT1Q9NZU1 646 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 DCDC2Q9UHG0 476 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 CPA4Q9UI42 421 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 Q9Y3F1 56 aa17.02■□□□□ 0.32
VCAN-204ENST00000502527 ZNF236Q9UL36 1845 aa17.02■□□□□ 0.31
VCAN-204ENST00000502527 NCAM2O15394 837 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 FYNP06241 537 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 GNAZP19086 355 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 LHX1P48742 406 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 HCAR3P49019 387 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 BEX3Q00994 111 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 KIAA0319Q5VV43 1072 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 C4orf50Q6ZRC1 276 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 TTC7BQ86TV6 843 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 ALYREFQ86V81 257 aaKnown RBP17.01■□□□□ 0.31
VCAN-204ENST00000502527 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 PPP1R14CQ8TAE6 165 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 MCUR1Q96AQ8 359 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 SENP8Q96LD8 212 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 CRTAC1Q9NQ79 661 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 CNGB3Q9NQW8 809 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 PIH1D1Q9NWS0 290 aaKnown RBP17.01■□□□□ 0.31
VCAN-204ENST00000502527 HBS1LQ9Y450 684 aaKnown RBP17.01■□□□□ 0.31
VCAN-204ENST00000502527 C9IYK1 514 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 TPP1O14773 563 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 NRP1O14786 923 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 AP1G2O75843 785 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 ALDOAP04075 364 aaKnown RBP17.01■□□□□ 0.31
VCAN-204ENST00000502527 TPBGLP0DKB5 382 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 ERCC2P18074 760 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 AQP5P55064 265 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 GJA9P57773 515 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 DAOAP59103 153 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 PDE1BQ01064 536 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 FASTKD1Q53R41 847 aaKnown RBP17.01■□□□□ 0.31
VCAN-204ENST00000502527 SPANXN3Q5MJ09 141 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 RASSF3Q86WH2 238 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 C2orf69Q8N8R5 385 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 SYT15Q9BQS2 421 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 SIKE1Q9BRV8 207 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 MMADHCQ9H3L0 296 aaPredicted RBP17.01■□□□□ 0.31
VCAN-204ENST00000502527 ZFATQ9P243 1243 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 KLHL8Q9P2G9 620 aaPredicted RBP17.01■□□□□ 0.31
VCAN-204ENST00000502527 TXNDC16Q9P2K2 825 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 FBXW11Q9UKB1 542 aa17.01■□□□□ 0.31
VCAN-204ENST00000502527 SCN4AP35499 1836 aa17■□□□□ 0.31
VCAN-204ENST00000502527 ITGA2BP08514 1039 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms