RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
VIM-208ENST00000497849 NEUROG2Q9H2A3 272 aa17.19■□□□□ 0.34
VIM-208ENST00000497849 SUN2Q9UH99 717 aa17.19■□□□□ 0.34
VIM-208ENST00000497849 ADAMTS1Q9UHI8 967 aa17.19■□□□□ 0.34
VIM-208ENST00000497849 GGA2Q9UJY4 613 aa17.19■□□□□ 0.34
VIM-208ENST00000497849 SCML1Q9UN30 329 aa17.19■□□□□ 0.34
VIM-208ENST00000497849 UBR5O95071 2799 aaPredicted RBP17.18■□□□□ 0.34
VIM-208ENST00000497849 A0A1W2PP55 124 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 TLR4O00206 839 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 STX6O43752 255 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
VIM-208ENST00000497849 PABPC1P11940 636 aaKnown RBP17.18■□□□□ 0.34
VIM-208ENST00000497849 P4HA1P13674 534 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 INCA1Q0VD86 236 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 BECN1Q14457 450 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 TRIP4Q15650 581 aaPredicted RBP17.18■□□□□ 0.34
VIM-208ENST00000497849 SGSM1Q2NKQ1 1148 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 FAM26FQ5R3K3 315 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 SPATS2Q86XZ4 545 aaKnown RBP17.18■□□□□ 0.34
VIM-208ENST00000497849 DHX40Q8IX18 779 aaKnown RBP17.18■□□□□ 0.34
VIM-208ENST00000497849 WFDC5Q8TCV5 224 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 IPO9Q96P70 1041 aaKnown RBP17.18■□□□□ 0.34
VIM-208ENST00000497849 DUSP16Q9BY84 665 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 TNMDQ9H2S6 317 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 ERVMER34-1Q9H9K5 563 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 KBTBD4Q9NVX7 518 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 UBE4BO95155 1302 aa17.18■□□□□ 0.34
VIM-208ENST00000497849 DOCK9Q9BZ29 2069 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 EXOC3O60645 756 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 ASS1P00966 412 aaKnown RBP17.17■□□□□ 0.34
VIM-208ENST00000497849 MPOP05164 745 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 CD70P32970 193 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 SGSHP51688 502 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 DLG4P78352 724 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 EHHADHQ08426 723 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 OR2T34Q8NGX1 318 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 PLD4Q96BZ4 506 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 MED8Q96G25 268 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 STOML2Q9UJZ1 356 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 STRIP2Q9ULQ0 834 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 SSUH2Q9Y2M2 353 aa17.17■□□□□ 0.34
VIM-208ENST00000497849 NYNRINQ9P2P1 1898 aaKnown RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 LRRC72A6NJI9 287 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 MID1O15344 667 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 SIN3BO75182 1162 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 DXOO77932 396 aaKnown RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 KIF20AO95235 890 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 RPN1P04843 607 aaKnown RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 ATP5BP06576 529 aaKnown RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 CCR5P51681 352 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 E2F1Q01094 437 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 VAC14Q08AM6 782 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 E2F4Q16254 413 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 ZACNQ401N2 412 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 PPP1R26Q5T8A7 1209 aaPredicted RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 FAM173BQ6P4H8 233 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 RSRC2Q7L4I2 434 aaKnown RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 KCNE4Q8WWG9 221 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 TAF4BQ92750 862 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 TMA16Q96EY4 203 aaKnown RBP17.16■□□□□ 0.34
VIM-208ENST00000497849 SERAC1Q96JX3 654 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 NT5C1AQ9BXI3 368 aa17.16■□□□□ 0.34
VIM-208ENST00000497849 BOD1L1Q8NFC6 3051 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 TRIM38O00635 465 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 KLK10O43240 276 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 SIGLEC6O43699 453 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 RNASEH2AO75792 299 aaKnown RBP17.15■□□□□ 0.34
VIM-208ENST00000497849 POLR2EP19388 210 aaKnown RBP17.15■□□□□ 0.34
VIM-208ENST00000497849 YWHAGP61981 247 aaKnown RBP eCLIP17.15■□□□□ 0.34
VIM-208ENST00000497849 GABREP78334 506 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 ASIC1P78348 528 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 CST6Q15828 149 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 CDCP2Q5VXM1 449 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 OXR1Q8N573 874 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 CGNQ9P2M7 1197 aaKnown RBP17.15■□□□□ 0.34
VIM-208ENST00000497849 TFIP11Q9UBB9 837 aaKnown RBP17.15■□□□□ 0.34
VIM-208ENST00000497849 FZD4Q9ULV1 537 aa17.15■□□□□ 0.34
VIM-208ENST00000497849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
VIM-208ENST00000497849 SDC3O75056 442 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 CSRP3P50461 194 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 ZNF445P59923 1031 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 ERVPABLB-1P60509 514 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 HNRNPA1L2Q32P51 320 aaKnown RBP17.14■□□□□ 0.33
VIM-208ENST00000497849 RAB41Q5JT25 222 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 KIAA1614Q5VZ46 1190 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 CNNM4Q6P4Q7 775 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 SV2AQ7L0J3 742 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 MMAAQ8IVH4 418 aaKnown RBP17.14■□□□□ 0.33
VIM-208ENST00000497849 LSMEM2Q8N112 164 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 ARHGAP18Q8N392 663 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 AADATQ8N5Z0 425 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 LMLNQ96KR4 655 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 MRGPRX3Q96LB0 322 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.14■□□□□ 0.33
VIM-208ENST00000497849 LRRC27Q9C0I9 530 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 APOBEC3GQ9HC16 384 aaKnown RBP17.14■□□□□ 0.33
VIM-208ENST00000497849 ASCL3Q9NQ33 180 aa17.14■□□□□ 0.33
VIM-208ENST00000497849 LATO43561 262 aa17.13■□□□□ 0.33
VIM-208ENST00000497849 RNASEH1O60930 286 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms