RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 NT5C3BQ969T7 300 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 LMLNQ96KR4 655 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 PRICKLE1Q96MT3 831 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 SYNCQ9H7C4 482 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 BZW2Q9Y6E2 419 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 GVINP1Q7Z2Y8 2422 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 KIF2AO00139 706 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 DAB1O75553 588 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 IPO7O95373 1038 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 CCDC172P0C7W6 258 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 NTSR1P30989 418 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 NOS2P35228 1153 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 CYLC1P35663 651 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 MATKP42679 507 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 LPAL2Q16609 132 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 MS4A13Q5J8X5 152 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 ANO7Q6IWH7 933 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 CCAR2Q8N163 923 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 MDGA1Q8NFP4 955 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 WFDC5Q8TCV5 224 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 BAP1Q92560 729 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 NPY6RQ99463 290 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 GABRG3Q99928 467 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.55■□□□□ 0.241e-8■■■■■ 33.1
CTDSP1-214ENST00000497677 ELOVL2Q9NXB9 296 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 TMEM59LQ9UK28 342 aa16.55■□□□□ 0.24
CTDSP1-214ENST00000497677 WASH3PC4AMC7 463 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 TBL1XO60907 577 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 RPP40O75818 363 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 MOCS2O96007 188 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 CCDC175P0C221 793 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 TFE3P19532 575 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 TGM1P22735 817 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 MMP8P22894 467 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 WASP42768 502 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 RPS24P62847 133 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 PTP4A2Q12974 167 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 ENPP2Q13822 863 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 TRNP1Q6NT89 227 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 IRF2BP2Q7Z5L9 587 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 ANKS1BQ7Z6G8 1248 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 CHPFQ8IZ52 775 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 TXLNBQ8N3L3 684 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 SLC30A5Q8TAD4 765 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 OLIG1Q8TAK6 271 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 BTN2A3PQ96KV6 586 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 PRMT1Q99873 361 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 DDX50Q9BQ39 737 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 DDIT4Q9NX09 232 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 CACNA2D2Q9NY47 1150 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 THAP10Q9P2Z0 257 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-214ENST00000497677 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 DCLK1O15075 740 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 TIMM44O43615 452 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 APOEP02649 317 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 SLC2A3P11169 496 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 HOXB2P14652 356 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 GBP1P32455 592 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 FLT3P36888 993 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 KRT83P78385 493 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 ARID5AQ03989 594 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 LAIR1Q6GTX8 287 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 KIAA1211LQ6NV74 962 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 TRIM72Q6ZMU5 477 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 MMS22LQ6ZRQ5 1243 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 PRR23BQ6ZRT6 265 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 ARCQ7LC44 396 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 BNIPLQ7Z465 357 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 ADIPOR2Q86V24 386 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 FAM160A2Q8N612 972 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 FIBINQ8TAL6 211 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 SORCS1Q8WY21 1168 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 ZC3H10Q96K80 434 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 SYT11Q9BT88 431 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 TPSD1Q9BZJ3 242 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 ANLNQ9NQW6 1124 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 ABCB8Q9NUT2 735 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 RRN3Q9NYV6 651 aa16.53■□□□□ 0.24
CTDSP1-214ENST00000497677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.53■□□□□ 0.247e-8■□□□□ 10.4
CTDSP1-214ENST00000497677 TCRBV21S2A2A0A5A6 115 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 LRRC53A6NM62 1247 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 I6L893 689 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 M0QYT0 321 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 SERPING1P05155 500 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 TACR2P21452 398 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 CCR1P32246 355 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 CXCR3P49682 368 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 NME3Q13232 169 aa16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 EIF4HQ15056 248 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 FAM102AQ5T9C2 384 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-214ENST00000497677 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms