RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ADH1CP00326 375 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 CTNNA2P26232 953 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 HTR7P34969 479 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 GGCXP38435 758 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 VCPP55072 806 aaKnown RBP22.47■■□□□ 1.19
C9orf3-222ENST00000496567 RUNX3Q13761 415 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 PDK2Q15119 407 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 DHCR24Q15392 516 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 CA9Q16790 459 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 ATP13A4Q4VNC1 1196 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 TJAP1Q5JTD0 557 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 TTC39BQ5VTQ0 682 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-222ENST00000496567 TPGS1Q6ZTW0 290 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 MAP7D3Q8IWC1 876 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 UBL4BQ8N7F7 174 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 KCTD6Q8NC69 237 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 RPRD1AQ96P16 312 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-222ENST00000496567 ECT2Q9H8V3 914 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 TRPV5Q9NQA5 729 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 PCDHA3Q9Y5H8 950 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 SNX10Q9Y5X0 201 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 TRDMT1O14717 391 aaKnown RBP22.46■■□□□ 1.19
C9orf3-222ENST00000496567 CREB3O43889 395 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 ARSAP15289 507 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 CDH6P55285 790 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 SEMA3BQ13214 749 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 KRT81Q14533 505 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 PPP6R3Q5H9R7 873 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-222ENST00000496567 ZNF569Q5MCW4 686 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 LY6G5CQ5SRR4 150 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 RHBDF2Q6PJF5 856 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 C14orf80Q86SX3 495 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 ZSCAN30Q86W11 494 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 TMEM25Q86YD3 366 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 C17orf53Q8N3J3 647 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-222ENST00000496567 HJURPQ8NCD3 748 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-222ENST00000496567 CSGALNACT1Q8TDX6 532 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 DDI1Q8WTU0 396 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 KCTD15Q96SI1 283 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-222ENST00000496567 MAGEB5Q9BZ81 275 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 HPS4Q9NQG7 708 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 MARK1Q9P0L2 795 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 PPARGC1AQ9UBK2 798 aaKnown RBP22.46■■□□□ 1.19
C9orf3-222ENST00000496567 TCF20Q9UGU0 1960 aaKnown RBP22.46■■□□□ 1.19
C9orf3-222ENST00000496567 IGLV3-10A0A075B6K4 115 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 FAM72CH0Y354 149 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 ARNTLO00327 626 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 LRIG2O94898 1065 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 CYP17A1P05093 508 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 ARL4AP40617 200 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 PFKPQ01813 784 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 GAD2Q05329 585 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 TNK2Q07912 1038 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 C5orf22Q49AR2 442 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 MPP7Q5T2T1 576 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 MEI1Q5TIA1 1274 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 FAM72AQ5TYM5 149 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 MANEALQ5VSG8 457 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 FAM72DQ6L9T8 149 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 FAM72BQ86X60 149 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 KATNAL2Q8IYT4 538 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 ZNF683Q8IZ20 524 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 TBC1D31Q96DN5 1066 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 HES6Q96HZ4 224 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 BBS2Q9BXC9 721 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 SORCS3Q9UPU3 1222 aa22.46■■□□□ 1.19
C9orf3-222ENST00000496567 DRGXA6NNA5 263 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 ADH5P11766 374 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 SRFP11831 508 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 ANO4Q32M45 955 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 ITPRIPL2Q3MIP1 535 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 GJD3Q8N144 294 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 FAM71BQ8TC56 605 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 KRT35Q92764 455 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 DNASE1L2Q92874 299 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 PRICKLE1Q96MT3 831 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-222ENST00000496567 RETREG1Q9H6L5 497 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 PCDH18Q9HCL0 1135 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 STIM2Q9P246 746 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 RCOR3Q9P2K3 495 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-222ENST00000496567 JRKLQ9Y4A0 524 aa22.45■■□□□ 1.18
C9orf3-222ENST00000496567 MYO10Q9HD67 2058 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 LRRD1A4D1F6 860 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 H3BRJ5 948 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 EEF2KO00418 725 aaKnown RBP22.44■■□□□ 1.18
C9orf3-222ENST00000496567 TBL1XO60907 577 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 KRT1P04264 644 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 KDELR1P24390 212 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 HCAR3P49019 387 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 ARSEP51690 589 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 RWDD2BP57060 319 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 TPI1P60174 286 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 FYB2Q5VWT5 728 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 RWDD4Q6NW29 188 aaKnown RBP22.44■■□□□ 1.18
C9orf3-222ENST00000496567 RNF135Q8IUD6 432 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 IGSF8Q969P0 613 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 ZYG11BQ9C0D3 744 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 SLC2A4RGQ9NR83 387 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 KLHL11Q9NVR0 708 aa22.44■■□□□ 1.18
C9orf3-222ENST00000496567 GTSE1Q9NYZ3 720 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms