RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	NOS2	P35228	1153 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SLC11A2	P49281	568 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MRPS21	P82921	87 aa	Known RBP	16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	PTP4A2	Q12974	167 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	CLEC16A	Q2KHT3	1053 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MPPE1	Q53F39	396 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	C10orf76	Q5T2E6	689 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	PIK3R6	Q5UE93	754 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TRIM72	Q6ZMU5	477 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MMS22L	Q6ZRQ5	1243 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	CEP68	Q76N32	757 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ALLC	Q8N6M5	410 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	KDF1	Q8NAX2	398 aa	Predicted RBP	16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TMA16	Q96EY4	203 aa	Known RBP	16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	NPY6R	Q99463	290 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	C11orf70	Q9BRQ4	267 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SYT11	Q9BT88	431 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	NUCKS1	Q9H1E3	243 aa	Known RBP	16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	FAM204A	Q9H8W3	233 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	DDIT4	Q9NX09	232 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TMEM59L	Q9UK28	342 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MYO6	Q9UM54	1294 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	WASF3	Q9UPY6	502 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325	AKAP13	Q12802	2813 aa		16.44	■□□□□ 0.22
PRKCZ-222	ENST00000496325		M0QYT0	321 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	GJB6	O95452	261 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	KLF8	O95600	359 aa	Predicted RBP	16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ZNF806	P0C7X5	589 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	HNRNPL	P14866	589 aa	Known RBP eCLIP	16.43	■□□□□ 0.22	1e-6	■■□□□ 11.7
PRKCZ-222	ENST00000496325	FLT3	P36888	993 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SCNN1A	P37088	669 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MATK	P42679	507 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	PXN	P49023	591 aa	Predicted RBP	16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	CENPC	Q03188	943 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	NME3	Q13232	169 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	DMC1	Q14565	340 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	GEN1	Q17RS7	908 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TCEAL6	Q6IPX3	200 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SYT13	Q7L8C5	426 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	C12orf50	Q8NA57	414 aa	Predicted RBP	16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	IL17RC	Q8NAC3	791 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MSANTD4	Q8NCY6	345 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	RNF214	Q8ND24	703 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TCEAL3	Q969E4	200 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	HHIP	Q96QV1	700 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	XPO4	Q9C0E2	1151 aa	Known RBP	16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SEPT11	Q9NVA2	429 aa	Known RBP	16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	16.43	■□□□□ 0.22	5e-6	■■■□□ 17.9
PRKCZ-222	ENST00000496325	MMP17	Q9ULZ9	603 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SLC8A2	Q9UPR5	921 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	NUP205	Q92621	2012 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	PLXND1	Q9Y4D7	1925 aa		16.43	■□□□□ 0.22
PRKCZ-222	ENST00000496325	NYNRIN	Q9P2P1	1898 aa	Known RBP	16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MUC22	E2RYF6	1773 aa	Predicted RBP	16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	KCNU1	A8MYU2	1149 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SGK1	O00141	431 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TBL1X	O60907	577 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ADAM23	O75077	832 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	APOE	P02649	317 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	GBP1	P32455	592 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	CNR2	P34972	360 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ASIC2	Q16515	512 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	PREPL	Q4J6C6	727 aa	Predicted RBP	16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	FIGN	Q5HY92	759 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SFMBT2	Q5VUG0	894 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	EGFLAM	Q63HQ2	1017 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	RAP1GAP2	Q684P5	730 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TMEM92	Q6UXU6	159 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	KBTBD6	Q86V97	674 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TXNDC5	Q8NBS9	432 aa	Known RBP	16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	WFDC5	Q8TCV5	224 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	CPLX3	Q8WVH0	158 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	NT5C3B	Q969T7	300 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	PRICKLE1	Q96MT3	831 aa	Predicted RBP	16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TBCB	Q99426	244 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	EDEM3	Q9BZQ6	932 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	HAUS4	Q9H6D7	363 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	METTL5	Q9NRN9	209 aa	Known RBP	16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	AIPL1	Q9NZN9	384 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SLC27A6	Q9Y2P4	619 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	STARD13	Q9Y3M8	1113 aa		16.42	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SRRM3	A6NNA2	597 aa	Predicted RBP	16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	CCDC172	P0C7W6	258 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SKIL	P12757	684 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TNFAIP3	P21580	790 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	WAS	P42768	502 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	SULT1E1	P49888	294 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ZNF445	P59923	1031 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	RPS24	P62847	133 aa	Known RBP	16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	FOXC1	Q12948	553 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	MS4A13	Q5J8X5	152 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	TMEM215	Q68D42	235 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ZNF571	Q7Z3V5	609 aa	Predicted RBP	16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	DNAAF5	Q86Y56	855 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	PHF13	Q86YI8	300 aa	Predicted RBP	16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	CFAP52	Q8N1V2	620 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	EMC1	Q8N766	993 aa		16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ZNF513	Q8N8E2	541 aa	Predicted RBP	16.41	■□□□□ 0.22
PRKCZ-222	ENST00000496325	ATP6V0D2	Q8N8Y2	350 aa		16.41	■□□□□ 0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms