RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TBR1Q16650 682 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 FNDC3BQ53EP0 1204 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 MDH1BQ5I0G3 518 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 CLEC14AQ86T13 490 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 MYCBPAPQ8TBZ2 947 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 CACTINQ8WUQ7 758 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 SORCS1Q8WY21 1168 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 GOLGA1Q92805 767 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 ATXN7L3BQ96GX2 97 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 SERAC1Q96JX3 654 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 ADNPQ9H2P0 1102 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 CHORDC1Q9UHD1 332 aaPredicted RBP10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 ANAPC2Q9UJX6 822 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 FBXO10Q9UK96 956 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 CKAP5Q14008 2032 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 NUMA1Q14980 2115 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
SMARCAL1-213ENST00000496037 PLXNA2O75051 1894 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 LRRC72A6NJI9 287 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 FFAR2O15552 330 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 TLR5O60602 858 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 MAGEC1O60732 1142 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 TNFSF15O95150 251 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 PDGFRBP09619 1106 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 THEGLP0DJG4 465 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 ALPPL2P10696 532 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 CKMT1AP12532 417 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 LMO2P25791 158 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 TRAPPC10P48553 1259 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 ATP1A2P50993 1020 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 POU5F1Q01860 360 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 SFSWAPQ12872 951 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 ORC2Q13416 577 aaPredicted RBP10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 TRIM29Q14134 588 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 SOWAHAQ2M3V2 549 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 SNX30Q5VWJ9 437 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 KRT79Q5XKE5 535 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 NCEH1Q6PIU2 408 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 JAZF1Q86VZ6 243 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 C1orf127Q8N9H9 656 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 OR4C6Q8NH72 309 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 GTF3C6Q969F1 213 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 MRGPRX2Q96LB1 330 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 AGO2Q9UKV8 859 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 ITGA11Q9UKX5 1188 aa10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 SPENQ96T58 3664 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-213ENST00000496037 TIMM44O43615 452 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 GREM1O60565 184 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 PENKP01210 267 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 CYBBP04839 570 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 ITGA2BP08514 1039 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 CACNA2D1P54289 1103 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 RBP5P82980 135 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF174Q15697 407 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF776Q68DI1 518 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 SLFN12LQ6IEE8 588 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 SLC39A4Q6P5W5 647 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 USP30Q70CQ3 517 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF366Q8N895 744 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 WDR36Q8NI36 951 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 KBTBD7Q8WVZ9 684 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 KCNN1Q92952 543 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 KLF16Q9BXK1 252 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF518BQ9C0D4 1074 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 KCND2Q9NZV8 630 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 TPX2Q9ULW0 747 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 SCML1Q9UN30 329 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 PLA2G4CQ9UP65 541 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 ICE1Q9Y2F5 2266 aa10.07□□□□□ -0.8
SMARCAL1-213ENST00000496037 A0A1W2PNU3 283 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 WNT9AO14904 365 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 PRMT3O60678 531 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 DTNBO60941 627 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 STK10O94804 968 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 F12P00748 615 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 ABCD1P33897 745 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 SLC5A3P53794 718 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 GALCP54803 685 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 CLCA4Q14CN2 919 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZRSR1Q15695 479 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 MANEAQ5SRI9 462 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 FYB2Q5VWT5 728 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 RBM44Q6ZP01 1051 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 C14orf80Q86SX3 495 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 SPATS2Q86XZ4 545 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 MFSD2AQ8NA29 543 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 OR2T34Q8NGX1 318 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 SCAMP5Q8TAC9 235 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 FAM174AQ8TBP5 190 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 IFI44Q8TCB0 444 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 PRR11Q96HE9 360 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 RBCK1Q9BYM8 510 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 PABPC3Q9H361 631 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF768Q9H5H4 540 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms