RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 C4orf22Q6V702 233 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 HDXQ7Z353 690 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 OLFM3Q96PB7 478 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 QKIQ96PU8 341 aaKnown RBP eCLIP25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 BRD8Q9H0E9 1235 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 LMAN2LQ9H0V9 348 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 SNX10Q9Y5X0 201 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 COCHO43405 550 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 MFSD11O43934 449 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 SEC31AO94979 1220 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 CSPG5O95196 566 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 FGF19O95750 216 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 OAS1P00973 400 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 F11P03951 625 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 SRGAP2BP0DMP2 458 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 MX2P20592 715 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 CDC25CP30307 473 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 HARS2P49590 506 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 LZTR1Q8N653 840 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 TFB1MQ8WVM0 346 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 MRPS31Q92665 395 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 FMO2Q99518 471 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 GRHL1Q9NZI5 618 aa25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 YBX2Q9Y2T7 364 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-205ENST00000495799 E9PAM4 449 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 HMBSP08397 361 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 PFKLP17858 780 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 ECHS1P30084 290 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 HOXA9P31269 272 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 PLTPP55058 493 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 PCGF5Q86SE9 256 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 ART4Q93070 314 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 RTP4Q96DX8 246 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 GDF15Q99988 308 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 ZNF334Q9HCZ1 680 aaPredicted RBP25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 ASAH2Q9NR71 780 aa25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 PPARGC1AQ9UBK2 798 aaKnown RBP25.14■■□□□ 1.62
PPP1R3F-205ENST00000495799 KCNN4O15554 427 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 IRS1P35568 1242 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 SLC11A2P49281 568 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 VPS41P49754 854 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 RBM10P98175 930 aaKnown RBP25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 SLC10A2Q12908 348 aaPredicted RBP25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 MS4A13Q5J8X5 152 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 PIK3R6Q5UE93 754 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 HEATR6Q6AI08 1181 aaKnown RBP25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 FAM71DQ8N9W8 422 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 AZIN2Q96A70 460 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 TSPYL1Q9H0U9 437 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 IL21Q9HBE4 155 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 MAN1C1Q9NR34 630 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZDHHC18Q9NUE0 388 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 ANAPC1Q9H1A4 1944 aa25.13■■□□□ 1.61
PPP1R3F-205ENST00000495799 DNALI1O14645 258 aaPredicted RBP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 CLASP2O75122 1294 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 STK10O94804 968 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 HNRNPA1P09651 372 aaKnown RBP eCLIP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 GABRR2P28476 465 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 GPS1Q13098 491 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 CAMK1Q14012 370 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 IZUMO3Q5VZ72 239 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 SPRED2Q7Z698 418 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 PAK5Q9P286 719 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 XPO7Q9UIA9 1087 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 ANAPC5Q9UJX4 755 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 OBSL1O75147 1896 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 WASH4PA8MWX3 477 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 IVDP26440 423 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 RBL1P28749 1068 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 GGCXP38435 758 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 GDF10P55107 478 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 AUHQ13825 339 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 P3H1Q32P28 736 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZDHHC24Q6UX98 284 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 CEP128Q6ZU80 1094 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 TMEM150AQ86TG1 271 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 TMC8Q8IU68 726 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 DDX50Q9BQ39 737 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 PBX4Q9BYU1 374 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 TPX2Q9ULW0 747 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 NEU3Q9UQ49 428 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 MFHAS1Q9Y4C4 1052 aa25.12■■□□□ 1.61
PPP1R3F-205ENST00000495799 SMAPO00193 183 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 XYLBO75191 536 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 MBL2P11226 248 aaPredicted RBP25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 PPP2R2DQ66LE6 453 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 CHSY1Q86X52 802 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 LEMD2Q8NC56 503 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 FBXO25Q8TCJ0 367 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 FOXP3Q9BZS1 431 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZYG11BQ9C0D3 744 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 NEUROG2Q9H2A3 272 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 NKX2-4Q9H2Z4 354 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 ACBD3Q9H3P7 528 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 RETREG1Q9H6L5 497 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 USP29Q9HBJ7 922 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 TRPC7Q9HCX4 862 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZNF446Q9NWS9 450 aa25.11■■□□□ 1.61
PPP1R3F-205ENST00000495799 C2orf78A6NCI8 922 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 CCL16O15467 120 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms