RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SH3GL2Q99962 352 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 KLC2Q9H0B6 622 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 NEUROG2Q9H2A3 272 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 TLR8Q9NR97 1041 aaKnown RBP10.6□□□□□ -0.71
HDAC3-214ENST00000495485 TMLHEQ9NVH6 421 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 ZDHHC7Q9NXF8 308 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 GOLGA6AQ9NYA3 693 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 COX16Q9P0S2 106 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 VPS18Q9P253 973 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 NEU2Q9Y3R4 380 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 HEY1Q9Y5J3 304 aa10.6□□□□□ -0.71
HDAC3-214ENST00000495485 HIDE1A8MVS5 230 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 TNFRSF10BO14763 440 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CREB3O43889 395 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CLASP2O75122 1294 aaKnown RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 SYF2O95926 243 aaKnown RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 HNRNPA1P09651 372 aaKnown RBP eCLIP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 IL4RP24394 825 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 IVDP26440 423 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 YWHAQP27348 245 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 ELF1P32519 619 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CA8P35219 290 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 PHBP35232 272 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 VPS41P49754 854 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CLCN4P51793 760 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 COG7P83436 770 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 PLD1Q13393 1074 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 SYPL2Q5VXT5 272 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 HEATR6Q6AI08 1181 aaKnown RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 RHBDF2Q6PJF5 856 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 DENND5BQ6ZUT9 1274 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 ANKS1BQ7Z6G8 1248 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 ZC3H18Q86VM9 953 aaKnown RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 LZTR1Q8N653 840 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CCDC185Q8N715 623 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 PDZD8Q8NEN9 1154 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 PCDH19Q8TAB3 1148 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 TFB1MQ8WVM0 346 aaKnown RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 RTP4Q96DX8 246 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 HAPLN3Q96S86 360 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 KCTD15Q96SI1 283 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 TMEM209Q96SK2 561 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 FAM118BQ9BPY3 351 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CLSTN3Q9BQT9 956 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 TXLNGYQ9BZA5 131 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 OSBPL2Q9H1P3 480 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CATSPERBQ9H7T0 1116 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 UBE2ZQ9H832 354 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 PIGVQ9NUD9 493 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 GPATCH2LQ9NWQ4 482 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CLIC5Q9NZA1 410 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 CWC15Q9P013 229 aaKnown RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 THEGQ9P2T0 379 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 AFF4Q9UHB7 1163 aaKnown RBP10.59□□□□□ -0.71
HDAC3-214ENST00000495485 HCFC2Q9Y5Z7 792 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 PLXNA3P51805 1871 aa10.59□□□□□ -0.71
HDAC3-214ENST00000495485 C5orf42Q9H799 3197 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 F8W810 466 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 AGPSO00116 658 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 C2CD2LO14523 706 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 CHADO15335 359 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 FGF10O15520 208 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 KCNN4O15554 427 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 ABLIM3O94929 683 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 TTC4O95801 387 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 HAPLN1P10915 354 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 TSHRP16473 764 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 TFE3P19532 575 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 FDFT1P37268 417 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 CACNA2D1P54289 1103 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 ARPP19P56211 112 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 BASP1P80723 227 aaKnown RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 IFRD2Q12894 506 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 PPP2R5DQ14738 602 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 PAFAH1B3Q15102 231 aaKnown RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 CA9Q16790 459 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 CCDC142Q17RM4 750 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 MGAT5BQ3V5L5 792 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 SLC45A4Q5BKX6 768 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 CES5AQ6NT32 575 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 LILRA6Q6PI73 481 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 RFX8Q6ZV50 586 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 HFE2Q6ZVN8 426 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 TAS1R1Q7RTX1 841 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 GPRIN1Q7Z2K8 1008 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 TCEAL8Q8IYN2 117 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 PDIK1LQ8N165 341 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 PQLC3Q8N755 202 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 ATP6V0D2Q8N8Y2 350 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 FAM71DQ8N9W8 422 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 SLC22A17Q8WUG5 538 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 OVCA2Q8WZ82 227 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 NDRG1Q92597 394 aaKnown RBP10.58□□□□□ -0.72
HDAC3-214ENST00000495485 EDEM1Q92611 657 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 FBXO32Q969P5 355 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms