RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 DHTKD1Q96HY7 919 aaPredicted RBP22.97■■□□□ 1.27
HDDC3-203ENST00000494993 HSFY1Q96LI6 401 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 TIGD1Q96MW7 591 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 C6orf106Q9H6K1 298 aaPredicted RBP22.97■■□□□ 1.27
HDDC3-203ENST00000494993 PCOLCE2Q9UKZ9 415 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 GOLGA6L7A0A1B0GV03 622 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 IRAK2O43187 625 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 ACSL4O60488 711 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 CBFA2T3O75081 653 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 ATP5BP06576 529 aaKnown RBP22.96■■□□□ 1.27
HDDC3-203ENST00000494993 SLC6A4P31645 630 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 CD70P32970 193 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 TBX4P57082 545 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 ZBTB16Q05516 673 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 LMO3Q8TAP4 145 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 GOLGA1Q92805 767 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 PRSS16Q9NQE7 514 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 TM7SF3Q9NS93 570 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 FNDC3AQ9Y2H6 1198 aaKnown RBP22.96■■□□□ 1.27
HDDC3-203ENST00000494993 ZFYVE26Q68DK2 2539 aa22.96■■□□□ 1.27
HDDC3-203ENST00000494993 FBXO21O94952 628 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 CALCAP01258 141 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 CD44P16070 742 aaKnown RBP22.95■■□□□ 1.26
HDDC3-203ENST00000494993 POLR2EP19388 210 aaKnown RBP22.95■■□□□ 1.26
HDDC3-203ENST00000494993 PPP1R2P41236 205 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 RPS14P62263 151 aaKnown RBP22.95■■□□□ 1.26
HDDC3-203ENST00000494993 CETN1Q12798 172 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 HLA-BQ31612 363 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 ISM2Q6H9L7 571 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 GLRX5Q86SX6 157 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 ZNF557Q8N988 423 aaPredicted RBP22.95■■□□□ 1.26
HDDC3-203ENST00000494993 AZIN2Q96A70 460 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.95■■□□□ 1.26
HDDC3-203ENST00000494993 SLCO1B1Q9Y6L6 691 aa22.95■■□□□ 1.26
HDDC3-203ENST00000494993 ANKRD11Q6UB99 2663 aaPredicted RBP22.95■■□□□ 1.26
HDDC3-203ENST00000494993 A0A1B0GVT2 93 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 P4HA2O15460 535 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 SEMA4FO95754 770 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 DNTTP04053 509 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 AFF3P51826 1226 aaKnown RBP22.94■■□□□ 1.26
HDDC3-203ENST00000494993 NADSYN1Q6IA69 706 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 MFN1Q8IWA4 741 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 PNPLA1Q8N8W4 532 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 SETD7Q8WTS6 366 aaKnown RBP22.94■■□□□ 1.26
HDDC3-203ENST00000494993 LMLNQ96KR4 655 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 PRICKLE1Q96MT3 831 aaPredicted RBP22.94■■□□□ 1.26
HDDC3-203ENST00000494993 BTBD1Q9H0C5 482 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 SUN2Q9UH99 717 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 MAN1B1Q9UKM7 699 aa22.94■■□□□ 1.26
HDDC3-203ENST00000494993 APOBEC2Q9Y235 224 aaKnown RBP22.94■■□□□ 1.26
HDDC3-203ENST00000494993 CSNK1EP49674 416 aaKnown RBP22.93■■□□□ 1.26
HDDC3-203ENST00000494993 GCNT1Q02742 428 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 TTC31Q49AM3 519 aaPredicted RBP22.93■■□□□ 1.26
HDDC3-203ENST00000494993 ZNF776Q68DI1 518 aaPredicted RBP22.93■■□□□ 1.26
HDDC3-203ENST00000494993 TTI2Q6NXR4 508 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 RRAGAQ7L523 313 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 ARHGEF19Q8IW93 802 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 HJURPQ8NCD3 748 aaPredicted RBP22.93■■□□□ 1.26
HDDC3-203ENST00000494993 FIBINQ8TAL6 211 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 FCRL2Q96LA5 508 aaPredicted RBP22.93■■□□□ 1.26
HDDC3-203ENST00000494993 DDX50Q9BQ39 737 aaKnown RBP22.93■■□□□ 1.26
HDDC3-203ENST00000494993 MIS12Q9H081 205 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 OSGEPQ9NPF4 335 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 STIM2Q9P246 746 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 PCDHGB2Q9Y5G2 931 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 CACNA1GO43497 2377 aa22.93■■□□□ 1.26
HDDC3-203ENST00000494993 TYW5A2RUC4 315 aaKnown RBP22.92■■□□□ 1.26
HDDC3-203ENST00000494993 FYNP06241 537 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 KLHL10Q6JEL2 608 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 DBX2Q6ZNG2 339 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 ELOA2Q8IYF1 753 aaPredicted RBP22.92■■□□□ 1.26
HDDC3-203ENST00000494993 BAHD1Q8TBE0 780 aaPredicted RBP22.92■■□□□ 1.26
HDDC3-203ENST00000494993 DQX1Q8TE96 717 aaKnown RBP22.92■■□□□ 1.26
HDDC3-203ENST00000494993 TTC17Q96AE7 1141 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 BIRC7Q96CA5 298 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 MYO19Q96H55 970 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 SERPINB11Q96P15 392 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 SGK2Q9HBY8 427 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 TM9SF3Q9HD45 589 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 FREM2Q5SZK8 3169 aa22.92■■□□□ 1.26
HDDC3-203ENST00000494993 DSPP15924 2871 aaKnown RBP22.91■■□□□ 1.26
HDDC3-203ENST00000494993 FLRT2O43155 660 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 CAPNS1P04632 268 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 RPL34P49207 117 aaKnown RBP22.91■■□□□ 1.26
HDDC3-203ENST00000494993 NNTQ13423 1086 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 TEAD4Q15561 434 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 KIF19Q2TAC6 998 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 FOXR2Q6PJQ5 311 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 SLCO6A1Q86UG4 719 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 EHBP1Q8NDI1 1231 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 NELFBQ8WX92 580 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 MYEOVQ96EZ4 313 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 RSPH9Q9H1X1 276 aaPredicted RBP22.91■■□□□ 1.26
HDDC3-203ENST00000494993 MTG2Q9H4K7 406 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 INTS6Q9UL03 887 aaKnown RBP22.91■■□□□ 1.26
HDDC3-203ENST00000494993 TLR6Q9Y2C9 796 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 SNX11Q9Y5W9 270 aa22.91■■□□□ 1.26
HDDC3-203ENST00000494993 GOLGA4Q13439 2230 aaKnown RBP22.91■■□□□ 1.26
HDDC3-203ENST00000494993 FSBPO95073 299 aa22.9■■□□□ 1.26
HDDC3-203ENST00000494993 ASLP04424 464 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms