RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HOXC13P31276 330 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
LIME1-209ENST00000494776 CXCR3P49682 368 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 PTP4A2Q12974 167 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 CDO1Q16878 200 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 BRMS1LQ5PSV4 323 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 RABGAP1LQ5R372 815 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 E4F1Q66K89 784 aaPredicted RBP16.49■□□□□ 0.23
LIME1-209ENST00000494776 ZNF571Q7Z3V5 609 aaPredicted RBP16.49■□□□□ 0.23
LIME1-209ENST00000494776 VPS36Q86VN1 386 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 WDR5BQ86VZ2 330 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 MCOLN2Q8IZK6 566 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 C3orf20Q8ND61 904 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 WFIKKN2Q8TEU8 576 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 RXFP2Q8WXD0 754 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 NT5C3BQ969T7 300 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 PGAP3Q96FM1 320 aaPredicted RBP16.49■□□□□ 0.23
LIME1-209ENST00000494776 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.49■□□□□ 0.23
LIME1-209ENST00000494776 ELOVL2Q9NXB9 296 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
LIME1-209ENST00000494776 GGA2Q9UJY4 613 aa16.49■□□□□ 0.23
LIME1-209ENST00000494776 BZW2Q9Y6E2 419 aaKnown RBP16.49■□□□□ 0.23
LIME1-209ENST00000494776 ITIH6Q6UXX5 1313 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 AXIN1O15169 862 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 ADAM23O75077 832 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 PAGE1O75459 146 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 ADCY5O95622 1261 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 LMNAP02545 664 aaKnown RBP16.48■□□□□ 0.23
LIME1-209ENST00000494776 TPM1P09493 284 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 PABPC1P11940 636 aaKnown RBP16.48■□□□□ 0.23
LIME1-209ENST00000494776 HOXB2P14652 356 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 DESP17661 470 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 HLA-FP30511 346 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 CASP14P31944 242 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 CNR2P34972 360 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 GSCP56915 257 aaPredicted RBP16.48■□□□□ 0.23
LIME1-209ENST00000494776 EIF4HQ15056 248 aaKnown RBP16.48■□□□□ 0.23
LIME1-209ENST00000494776 OTUD1Q5VV17 481 aaPredicted RBP16.48■□□□□ 0.23
LIME1-209ENST00000494776 ANO7Q6IWH7 933 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 TRNP1Q6NT89 227 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 TMEM92Q6UXU6 159 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 PRR23BQ6ZRT6 265 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 CEP68Q76N32 757 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 CHST9Q7L1S5 443 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 AHI1Q8N157 1196 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 PGBD3Q8N328 593 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 JOSD2Q8TAC2 188 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 SYN2Q92777 582 aaPredicted RBP16.48■□□□□ 0.23
LIME1-209ENST00000494776 MYEOVQ96EZ4 313 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 RPRD1AQ96P16 312 aaPredicted RBP16.48■□□□□ 0.23
LIME1-209ENST00000494776 ACOX2Q99424 681 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 SYT11Q9BT88 431 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 CACNA2D2Q9NY47 1150 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 TAS2R14Q9NYV8 317 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 RAB23Q9ULC3 237 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 VANGL2Q9ULK5 521 aa16.48■□□□□ 0.23
LIME1-209ENST00000494776 CCDC163A0A0D9SF12 145 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 TCRBV21S2A2A0A5A6 115 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 C2CD4BA6NLJ0 364 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 SIGLEC16A6NMB1 481 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 NPC1O15118 1278 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 LILRB5O75023 590 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 LUC7L3O95232 432 aaKnown RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 GYPCP04921 128 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 SERPING1P05155 500 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 HNRNPLP14866 589 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIME1-209ENST00000494776 POLR2EP19388 210 aaKnown RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 GPD1P21695 349 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 RFC1P35251 1148 aaPredicted RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 ATXN1P54253 815 aaKnown RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 AUHQ13825 339 aaKnown RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 TRIM14Q14142 442 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 SIM2Q14190 667 aaPredicted RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 C15orf59Q2T9L4 293 aaPredicted RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 CCDC14Q49A88 953 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 TTC39BQ5VTQ0 682 aaPredicted RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 SPECC1LQ69YQ0 1117 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 FBXL22Q6P050 247 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 DCUN1D2Q6PH85 259 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 LRRC31Q6UY01 552 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 FAM131BQ86XD5 332 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 FIBINQ8TAL6 211 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 WFDC5Q8TCV5 224 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 VCPIP1Q96JH7 1222 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 MCEEQ96PE7 176 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 PRMT1Q99873 361 aaKnown RBP16.47■□□□□ 0.23
LIME1-209ENST00000494776 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 ARHGEF38Q9NXL2 777 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 EBF1Q9UH73 591 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 HCN2Q9UL51 889 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 PLA2G4CQ9UP65 541 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 HS3ST4Q9Y661 456 aa16.47■□□□□ 0.23
LIME1-209ENST00000494776 PRR23AA6NEV1 266 aa16.46■□□□□ 0.23
LIME1-209ENST00000494776 RTN2O75298 545 aa16.46■□□□□ 0.23
LIME1-209ENST00000494776 MOCS3O95396 460 aa16.46■□□□□ 0.23
LIME1-209ENST00000494776 FTLP02792 175 aaPredicted RBP16.46■□□□□ 0.23
LIME1-209ENST00000494776 ATP5BP06576 529 aaKnown RBP16.46■□□□□ 0.23
LIME1-209ENST00000494776 CHRM1P11229 460 aaPredicted RBP16.46■□□□□ 0.23
LIME1-209ENST00000494776 GZMAP12544 262 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms