RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SRGAP2CP0DJJ0 459 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 SRGAP2BP0DMP2 458 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 RALBP11234 206 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 XRCC1P18887 633 aaPredicted RBP15.77■□□□□ 0.12
SDF4-207ENST00000494748 GBE1Q04446 702 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 SULT2A1Q06520 285 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 STILQ15468 1287 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 CDO1Q16878 200 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 RSBN1LQ6PCB5 846 aaPredicted RBP15.77■□□□□ 0.12
SDF4-207ENST00000494748 POTEAQ6S8J7 498 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 KHSRPQ92945 711 aaKnown RBP eCLIP15.77■□□□□ 0.12
SDF4-207ENST00000494748 ATG4CQ96DT6 458 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 CDH19Q9H159 772 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 ZNF385DQ9H6B1 395 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 ZNF302Q9NR11 478 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 VPS28Q9UK41 221 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 CILPO75339 1184 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 TNFAIP8O95379 198 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 MMP10P09238 476 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 ATP6V1B1P15313 513 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 PROZP22891 400 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 CNGA3Q16281 694 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 INSCQ1MX18 579 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 FKBP1CQ5VVH2 108 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 NLGN1Q8N2Q7 840 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.77■□□□□ 0.12
SDF4-207ENST00000494748 DIS3LQ8TF46 1054 aaKnown RBP15.77■□□□□ 0.12
SDF4-207ENST00000494748 MAGEB5Q9BZ81 275 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 TIMMDC1Q9NPL8 285 aa15.77■□□□□ 0.12
SDF4-207ENST00000494748 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
SDF4-207ENST00000494748 hCG_2014768A0A024R1R8 64 aa15.77■□□□□ 0.11
SDF4-207ENST00000494748 SPDYE16A6NNV3 312 aaPredicted RBP15.77■□□□□ 0.11
SDF4-207ENST00000494748 PDGFRAP16234 1089 aa15.77■□□□□ 0.11
SDF4-207ENST00000494748 CDH2P19022 906 aaPredicted RBP15.77■□□□□ 0.11
SDF4-207ENST00000494748 MRPS22P82650 360 aaKnown RBP15.77■□□□□ 0.11
SDF4-207ENST00000494748 KRT81Q14533 505 aa15.77■□□□□ 0.11
SDF4-207ENST00000494748 KLC3Q6P597 504 aa15.77■□□□□ 0.11
SDF4-207ENST00000494748 PLD6Q8N2A8 252 aaKnown RBP15.77■□□□□ 0.11
SDF4-207ENST00000494748 TMEM102Q8N9M5 508 aaPredicted RBP15.77■□□□□ 0.11
SDF4-207ENST00000494748 SNRNP25Q9BV90 132 aaKnown RBP15.77■□□□□ 0.11
SDF4-207ENST00000494748 PDZD7Q9H5P4 517 aa15.77■□□□□ 0.11
SDF4-207ENST00000494748 PRPF19Q9UMS4 504 aaKnown RBP15.77■□□□□ 0.11
SDF4-207ENST00000494748 G3V2L1 256 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 H3BSA7 217 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 M0QYV0 167 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 PRPSAP2O60256 369 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 GRAP2O75791 330 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 UBA3Q8TBC4 463 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 PPP4R1Q8TF05 950 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 ISL2Q96A47 359 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 CLMNQ96JQ2 1002 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 CNDP1Q96KN2 507 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 PRPF18Q99633 342 aaKnown RBP15.76■□□□□ 0.11
SDF4-207ENST00000494748 PKP2Q99959 881 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 PRDM16Q9HAZ2 1276 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 PTPRHQ9HD43 1115 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 B4GALT4O60513 344 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 HDAC4P56524 1084 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 CEACAM7Q14002 265 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
SDF4-207ENST00000494748 FAM83AQ86UY5 434 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 TMEM192Q8IY95 271 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 KLHL32Q96NJ5 620 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 RPAP3Q9H6T3 665 aaPredicted RBP15.76■□□□□ 0.11
SDF4-207ENST00000494748 RHBDL2Q9NX52 303 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 PADI4Q9UM07 663 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 SCAF8Q9UPN6 1271 aaKnown RBP15.76■□□□□ 0.11
SDF4-207ENST00000494748 DPYSL4O14531 572 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 FSTL1Q12841 308 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 STYK1Q6J9G0 422 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 ADCY4Q8NFM4 1077 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 RIN3Q8TB24 985 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 NSUN6Q8TEA1 469 aaKnown RBP15.76■□□□□ 0.11
SDF4-207ENST00000494748 GBA2Q9HCG7 927 aaPredicted RBP15.76■□□□□ 0.11
SDF4-207ENST00000494748 RNF11Q9Y3C5 154 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 AFG3L2Q9Y4W6 797 aa15.76■□□□□ 0.11
SDF4-207ENST00000494748 DOCK1Q14185 1865 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 PIK3R1P27986 724 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 MSX2P35548 267 aaPredicted RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 IYDQ6PHW0 289 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 DSELQ8IZU8 1212 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 SLC7A14Q8TBB6 771 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 PRPF31Q8WWY3 499 aaKnown RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 LZICQ8WZA0 190 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 CATSPER2Q96P56 530 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 QKIQ96PU8 341 aaKnown RBP eCLIP15.75■□□□□ 0.11
SDF4-207ENST00000494748 MRPL4Q9BYD3 311 aaKnown RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 INO80BQ9C086 356 aaPredicted RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 COPS7BQ9H9Q2 264 aaPredicted RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 A0A0G2JMZ2 1700 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 LRRC37A2A6NM11 1700 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 FAM163BP0C2L3 166 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 TFE3P19532 575 aaPredicted RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 SH2D4BQ5SQS7 431 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 C4orf22Q6V702 233 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 CHERPQ8IWX8 916 aaKnown RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 TNS4Q8IZW8 715 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 NUP93Q8N1F7 819 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 C1orf127Q8N9H9 656 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 TMEM176AQ96HP8 235 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms