RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZMAT5Q9UDW3 170 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF639Q9UID6 485 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RAD54BQ9Y620 910 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 GAKO14976 1311 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 STRCP1A6NGW2 1772 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 A0A1W2PPW3 197 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 H2AFYO75367 372 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RNASEH2AO75792 299 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MYO1DO94832 1006 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TDP2O95551 362 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SERPINE1P05121 402 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 JUNP05412 331 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PTPN1P18031 435 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ENPP1P22413 925 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SLC26A2P50443 739 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 KLF10Q13118 480 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PMS2P3Q13401 168 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 LRP8Q14114 963 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 FLOT2Q14254 428 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PPP2R5DQ14738 602 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PLEKHA7Q6IQ23 1121 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 CDHR3Q6ZTQ4 885 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RFPL4BQ6ZWI9 263 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MON1BQ7L1V2 547 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 CPNE8Q86YQ8 564 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 CCDC60Q8IWA6 550 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MCOLN2Q8IZK6 566 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SLC43A3Q8NBI5 491 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PDZD8Q8NEN9 1154 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PHF10Q8WUB8 498 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SLC7A3Q8WY07 619 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ATP2A3Q93084 1043 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TRIM63Q969Q1 353 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SLITRK1Q96PX8 696 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 EBF4Q9BQW3 602 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 GON7Q9BXV9 100 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ACP6Q9NPH0 428 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TOPORSQ9NS56 1045 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 NXF1Q9UBU9 619 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 DAPK2Q9UIK4 370 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 POU2F3Q9UKI9 436 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TAF1P21675 1872 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MYOCOSA0A1B0GUC4 107 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RGSL1A5PLK6 1076 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 USP17L12C9JPN9 530 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 USP17L21D6R901 530 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TRIM38O00635 465 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ARHGAP33O14559 1287 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TRIM24O15164 1050 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 NMT2O60551 498 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TSPAN1O60635 241 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ZC3H11AO75152 810 aaKnown RBP eCLIP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 KRT37O76014 449 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SPATA31C1P0DKV0 1188 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ME2P23368 584 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RCVRNP35243 200 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ARSEP51690 589 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 AP2S1P53680 142 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RHBDL3P58872 404 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 GABARAPL2P60520 117 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TMPRSS15P98073 1019 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MPP1Q00013 466 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 GALNT3Q14435 633 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SNX17Q15036 470 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 CHI3L2Q15782 390 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 INAVAQ3KP66 663 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 C1orf220Q5T0J3 134 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 LGSNQ5TDP6 509 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF773Q6PK81 442 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TRIM72Q6ZMU5 477 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ABHD11Q8NFV4 315 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 HPS1Q92902 700 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TTC17Q96AE7 1141 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 KLHL32Q96NJ5 620 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ASB2Q96Q27 587 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ST6GALNAC4Q9H4F1 302 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ZFYVE28Q9HCC9 887 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 IVNS1ABPQ9Y6Y0 642 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 QSER1Q2KHR3 1735 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 C9IYK1 514 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SMIM22K7EJ46 135 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 PAPSS1O43252 624 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SORBS2O94875 1100 aaKnown RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 TOP3BO95985 862 aaKnown RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 BCL10O95999 233 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 MBL2P11226 248 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 CYP11B1P15538 503 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 PRKACBP22694 351 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 MAPK4P31152 587 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 GRK3P35626 688 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 MAGEA3P43357 314 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 NFX1Q12986 1120 aaKnown RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ARHGAP44Q17R89 818 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SHROOM1Q2M3G4 852 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 C15orf59Q2T9L4 293 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 MSS51Q4VC12 460 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 FNBP1LQ5T0N5 605 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 XKR5Q6UX68 686 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms