RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PRB1P04280 392 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 NCAM1P13591 858 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 ADORA2BP29275 332 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 CD6P30203 668 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 CASP14P31944 242 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 RDXP35241 583 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 KRT9P35527 623 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 DPP6P42658 865 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 IL12RB1P42701 662 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 DGKGP49619 791 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 KCNMA1Q12791 1236 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 CCDC157Q569K6 752 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 DCAF12L1Q5VU92 463 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 SDE2Q6IQ49 451 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 OR8K1Q8NGG5 319 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 TAS1R2Q8TE23 839 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 TWNKQ96RR1 684 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 GANQ9H2C0 597 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 GAREM1Q9H706 876 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 VRTNQ9H8Y1 702 aa12.29□□□□□ -0.44
CSNK1E-212ENST00000494610 A0A1B0GVT2 93 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 CILPO75339 1184 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 HMBSP08397 361 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 SLC9A1P19634 815 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 CSNK1EP49674 416 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 TUBP50607 506 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 TPMTP51580 245 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 NDST1P52848 882 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 POLR2FP61218 127 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 CYP4F3Q08477 520 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 SLC14A1Q13336 389 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 RAPGEF1Q13905 1077 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 ARID5BQ14865 1188 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 HLA-BQ31612 363 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 PPM1KQ8N3J5 372 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 SMARCD1Q96GM5 515 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 XPO6Q96QU8 1125 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 TM7SF3Q9NS93 570 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 ABHD10Q9NUJ1 306 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 MARK1Q9P0L2 795 aa12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 EIF2B4Q9UI10 523 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 BZW2Q9Y6E2 419 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-212ENST00000494610 A0A1B0GTW7 788 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 ASS1P00966 412 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 RARGP13631 454 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 HLA-EP13747 358 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 GNSP15586 552 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 FERP16591 822 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 PRKCHP24723 683 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 STAT1P42224 750 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 COPAP53621 1224 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 ZNF667Q5HYK9 610 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 WDR45BQ5MNZ6 344 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 SFMBT2Q5VUG0 894 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 FYB2Q5VWT5 728 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 TMEM215Q68D42 235 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 Q6ZNB5 142 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 RABEPKQ7Z6M1 372 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 SCD5Q86SK9 330 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 VPS36Q86VN1 386 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 ZNF366Q8N895 744 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 LMO3Q8TAP4 145 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 BAHD1Q8TBE0 780 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 CPLX3Q8WVH0 158 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 DNASE2BQ8WZ79 361 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 STK33Q9BYT3 514 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 SIX2Q9NPC8 291 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 ITM2CQ9NQX7 267 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 USP36Q9P275 1121 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 WDR35Q9P2L0 1181 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 DNAJC12Q9UKB3 198 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 FHOD1Q9Y613 1164 aa12.27□□□□□ -0.45
CSNK1E-212ENST00000494610 TRABD2BA6NFA1 517 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 F8VZ95 297 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 ZBTB24O43167 697 aaPredicted RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 STC2O76061 302 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 IPO7O95373 1038 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 FAM163BP0C2L3 166 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 HNRNPH3P31942 346 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 ATP5C1P36542 298 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 KLK7P49862 253 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 CDK17Q00537 523 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 IL9RQ01113 521 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 HNRNPDQ14103 355 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 ASIC2Q16515 512 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 KIF19Q2TAC6 998 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 C10orf120Q5SQS8 335 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 PRAMEF14Q5SWL7 426 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 CLEC20AQ6ZU45 233 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 NUDT18Q6ZVK8 323 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms