RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	NEDD8-MDP1	E9PL57	170 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	SGK1	O00141	431 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	CYP26A1	O43174	497 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	HOXC11	O43248	304 aa	Predicted RBP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	CILP	O75339	1184 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	ADRB1	P08588	477 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	TYR	P14679	529 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	NTSR1	P30989	418 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	CHKA	P35790	457 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	MXI1	P50539	228 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	YWHAE	P62258	255 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	COG7	P83436	770 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	INCA1	Q0VD86	236 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	EDRF1	Q3B7T1	1238 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	C1orf220	Q5T0J3	134 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	PMS2CL	Q68D20	193 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	TCEAL6	Q6IPX3	200 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	RSRC2	Q7L4I2	434 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	RASSF3	Q86WH2	238 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	MIB1	Q86YT6	1006 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	SFTPA1	Q8IWL2	248 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	CHPF	Q8IZ52	775 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	ARHGAP18	Q8N392	663 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	TERB1	Q8NA31	727 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	MDGA1	Q8NFP4	955 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	WFDC12	Q8WWY7	111 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	RLN3	Q8WXF3	142 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	PIGK	Q92643	395 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	TCEAL3	Q969E4	200 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	EEF2KMT	Q96G04	330 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEM176A	Q96HP8	235 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	NUSAP1	Q9BXS6	441 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	GTPBP4	Q9BZE4	634 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	DCLK3	Q9C098	648 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	MUC3B	Q9H195	1237 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	RASSF4	Q9H2L5	321 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	GOLPH3L	Q9H4A5	285 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	APOBEC3G	Q9HC16	384 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	SRA1	Q9HD15	236 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	PNPLA8	Q9NP80	782 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	ZDHHC4	Q9NPG8	344 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	RXFP3	Q9NSD7	469 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	RAB20	Q9NX57	234 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	HESX1	Q9UBX0	185 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	NUDT5	Q9UKK9	219 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	ZNF510	Q9Y2H8	683 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	OTOGL	Q3ZCN5	2332 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	COL4A2	P08572	1712 aa		7.92	□□□□□ -1.14
RBM39-238	ENST00000493853	DMXL1	Q9Y485	3027 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	ANTXRL	A6NF34	631 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	C4orf47	A7E2U8	309 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	LINC01387	J3KSC0	135 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	AP5Z1	O43299	807 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	DYRK3	O43781	588 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	CYBB	P04839	570 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	HMBS	P08397	361 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	HOXB2	P14652	356 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	CES1	P23141	567 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	P2RY2	P41231	377 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	DPP6	P42658	865 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	WAS	P42768	502 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	KIR2DL1	P43626	348 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	PGF	P49763	221 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	KIF11	P52732	1056 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	ATXN3	P54252	364 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	FKBP3	Q00688	224 aa	Known RBP	7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	MESP2	Q0VG99	397 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	EFEMP1	Q12805	493 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	PNOC	Q13519	176 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	STIM1	Q13586	685 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	E2F5	Q15329	346 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	DCAF17	Q5H9S7	520 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	KLHDC10	Q6PID8	442 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	XKR5	Q6UX68	686 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	ARMCX6	Q7L4S7	300 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	GPRIN1	Q7Z2K8	1008 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	CCDC186	Q7Z3E2	898 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEFF1	Q8IYR6	380 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	SMARCE1	Q969G3	411 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	WBP2	Q969T9	261 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	FAXDC2	Q96IV6	333 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	GSDMA	Q96QA5	445 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	TWNK	Q96RR1	684 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	DUSP9	Q99956	384 aa	Known RBP	7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	NMUR1	Q9HB89	426 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEM9B	Q9NQ34	198 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	CISH	Q9NSE2	258 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	CLIC5	Q9NZA1	410 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	RASAL2	Q9UJF2	1139 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	STRIP2	Q9ULQ0	834 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	ANK1	P16157	1881 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	TCHH	Q07283	1943 aa		7.91	□□□□□ -1.14
RBM39-238	ENST00000493853	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.9	□□□□□ -1.14
RBM39-238	ENST00000493853	HHLA1	C9JL84	531 aa		7.9	□□□□□ -1.14
RBM39-238	ENST00000493853	MDM4	O15151	490 aa		7.9	□□□□□ -1.14
RBM39-238	ENST00000493853	TRIM24	O15164	1050 aa		7.9	□□□□□ -1.14
RBM39-238	ENST00000493853	CACNG3	O60359	315 aa		7.9	□□□□□ -1.14

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