RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 HOXC6P09630 235 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 U2AF1L5P0DN76 240 aaPredicted RBP4.79□□□□□ -1.64
SMC4-223ENST00000493695 HILS1P60008 231 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 U2AF1Q01081 240 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMC4-223ENST00000493695 SRGAP1Q7Z6B7 1085 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 MAGEB6Q8N7X4 407 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 FAM156AQ8NDB6 213 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 OR52L2PQ8NGH6 319 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 TSR2Q969E8 191 aaKnown RBP4.79□□□□□ -1.64
SMC4-223ENST00000493695 ERVK-5Q9HDB9 667 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 NCKIPSDQ9NZQ3 722 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 PTGDR2Q9Y5Y4 395 aa4.79□□□□□ -1.64
SMC4-223ENST00000493695 SPATA31A5Q5VU36 1347 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 SPATA31A7Q8IWB4 1347 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 OR6C75A6NL08 312 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 GOLIM4O00461 696 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 PODXLO00592 558 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 LDB3O75112 727 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 RHCEP18577 417 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 ROR2Q01974 943 aaKnown RBP4.78□□□□□ -1.64
SMC4-223ENST00000493695 DMWDQ09019 674 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 FAXCQ5TGI0 409 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 TTLL5Q6EMB2 1281 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 PARM1Q6UWI2 310 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 KRT27Q7Z3Y8 459 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 ZFPM2Q8WW38 1151 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 ASB12Q8WXK4 309 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 GRAMD1AQ96CP6 724 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 ZNF419Q96HQ0 510 aaPredicted RBP4.78□□□□□ -1.64
SMC4-223ENST00000493695 C8orf48Q96LL4 319 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
SMC4-223ENST00000493695 A0A1B0GVT2 93 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 THAP12O43422 761 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 IFNA2P01563 188 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 ANXA2P07355 339 aaKnown RBP4.77□□□□□ -1.65
SMC4-223ENST00000493695 PRSS2P07478 247 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 PKMP14618 531 aaKnown RBP4.77□□□□□ -1.65
SMC4-223ENST00000493695 PEX2P28328 305 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 GPR18Q14330 331 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.77□□□□□ -1.65
SMC4-223ENST00000493695 ABLIM2Q6H8Q1 611 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 CRTC1Q6UUV9 634 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 MYO1HQ8N1T3 1032 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 CCDC150Q8NCX0 1101 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 IQCDQ96DY2 449 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 DCLK3Q9C098 648 aa4.77□□□□□ -1.65
SMC4-223ENST00000493695 KRCC1Q9NPI7 259 aaPredicted RBP4.77□□□□□ -1.65
SMC4-223ENST00000493695 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMC4-223ENST00000493695 DENND3A2RUS2 1198 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 MDM4O15151 490 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 KRT10P13645 584 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 ART1P52961 327 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 CRYZQ08257 329 aaKnown RBP4.76□□□□□ -1.65
SMC4-223ENST00000493695 CBFBQ13951 182 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 FAM90A2PQ658T7 463 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 CCDC144NLQ6NUI1 221 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 FBXL22Q6P050 247 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 ACSM6Q6P461 480 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 RTL10Q7L3V2 364 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 TTC8Q8TAM2 541 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 PHF21BQ96EK2 531 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 ZBTB26Q9HCK0 441 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 TBC1D14Q9P2M4 693 aa4.76□□□□□ -1.65
SMC4-223ENST00000493695 SCN5AQ14524 2016 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 A0A087WYN8 130 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 A6NNZ2 444 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 BECN2A8MW95 431 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 SOCS5O75159 536 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 ARP10275 920 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 CLCN5P51795 746 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 TTC39AQ5SRH9 613 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 RBM23Q86U06 439 aaKnown RBP4.75□□□□□ -1.65
SMC4-223ENST00000493695 GEMIN8Q9NWZ8 242 aaKnown RBP4.75□□□□□ -1.65
SMC4-223ENST00000493695 FZD10Q9ULW2 581 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 B3GNT3Q9Y2A9 372 aa4.75□□□□□ -1.65
SMC4-223ENST00000493695 INAFM1C9JVW0 142 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 F8W8V4 182 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 IL18RAPO95256 599 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 RFPL3SP0C7P2 107 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 PMPCAQ10713 525 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 Q5PR19 223 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 CCDC181Q5TID7 509 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 OTUD1Q5VV17 481 aaPredicted RBP4.74□□□□□ -1.65
SMC4-223ENST00000493695 CYB5RLQ6IPT4 315 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 ZNF474Q6S9Z5 364 aaPredicted RBP4.74□□□□□ -1.65
SMC4-223ENST00000493695 PRSS57Q6UWY2 283 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 C14orf80Q86SX3 495 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 GPSM1Q86YR5 675 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 LAS2Q8IYD9 372 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 TMEM255BQ8WV15 326 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 GLMPQ8WWB7 406 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 OVCA2Q8WZ82 227 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 CLMNQ96JQ2 1002 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 DOCK7Q96N67 2140 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 WDR24Q96S15 920 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 STRBPQ96SI9 672 aaKnown RBP4.74□□□□□ -1.65
SMC4-223ENST00000493695 PLAC1Q9HBJ0 212 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 PNPLA8Q9NP80 782 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 DDX20Q9UHI6 824 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms