RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 POLR2EP19388 210 aaKnown RBP15.2■□□□□ 0.02
ATG4B-223ENST00000493618 ACADSBP45954 432 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 MTIF2P46199 727 aaKnown RBP15.2■□□□□ 0.02
ATG4B-223ENST00000493618 PITX1P78337 314 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-223ENST00000493618 CAMK2GQ13555 558 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-223ENST00000493618 E2F5Q15329 346 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 TAF5Q15542 800 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 ST3GAL2Q16842 350 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 ZC3H12AQ5D1E8 599 aaKnown RBP15.2■□□□□ 0.02
ATG4B-223ENST00000493618 WDR45BQ5MNZ6 344 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 RAP1GAP2Q684P5 730 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 GBP6Q6ZN66 633 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 MMS22LQ6ZRQ5 1243 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 RABEPKQ7Z6M1 372 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 ZCCHC9Q8N567 271 aaKnown RBP15.2■□□□□ 0.02
ATG4B-223ENST00000493618 HJURPQ8NCD3 748 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-223ENST00000493618 FOXJ1Q92949 421 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 SLC39A13Q96H72 371 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 LHX5Q9H2C1 402 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 APEX2Q9UBZ4 518 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 SYNJ2BP-COX16A0A087WUM0 186 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 IRAK2O43187 625 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 SYPP08247 313 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-223ENST00000493618 GNSP15586 552 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 PON1P27169 355 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 OXTRP30559 389 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 SEMA3BQ13214 749 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 PDCLQ13371 301 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 TPD52L1Q16890 204 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-223ENST00000493618 EXOC3L4Q17RC7 722 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 HSP90AA4PQ58FG1 418 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 DCAF6Q58WW2 860 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 FSCBQ5H9T9 825 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 MS4A13Q5J8X5 152 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 ENOSF1Q7L5Y1 443 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 LGI2Q8N0V4 545 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 WDTC1Q8N5D0 677 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 SNX19Q92543 992 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 AZIN2Q96A70 460 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 LMLNQ96KR4 655 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 DDX50Q9BQ39 737 aaKnown RBP15.19■□□□□ 0.02
ATG4B-223ENST00000493618 NUP58Q9BVL2 599 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 SLC32A1Q9H598 525 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 PRSS16Q9NQE7 514 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 CHMP5Q9NZZ3 219 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 COX16Q9P0S2 106 aa15.19■□□□□ 0.02
ATG4B-223ENST00000493618 KMT2BQ9UMN6 2715 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 FRYQ5TBA9 3013 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 FAM170AA1A519 330 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 TYW5A2RUC4 315 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 SART1O43290 800 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 GRAP2O75791 330 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 TRUB2O95900 331 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 APOEP02649 317 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 ATP5BP06576 529 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 DLDP09622 509 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 ACSL1P33121 698 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 CSKP41240 450 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 CTSOP43234 321 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 RPS14P62263 151 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 FAM193AP78312 1265 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 SHC2P98077 582 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 GRIK2Q13002 908 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 MPP7Q5T2T1 576 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 PIP4P1Q86T03 277 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 TMEM110Q86TL2 294 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 CHSY1Q86X52 802 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 FIBINQ8TAL6 211 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 STK32AQ8WU08 396 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 CAMK1GQ96NX5 476 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 CLSTN2Q9H4D0 955 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 C6orf106Q9H6K1 298 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 FAM204AQ9H8W3 233 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 POPDC2Q9HBU9 364 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 SIX2Q9NPC8 291 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 SUSD2Q9UGT4 822 aa15.18■□□□□ 0.02
ATG4B-223ENST00000493618 EIF2B4Q9UI10 523 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 INTS6Q9UL03 887 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 MAP1BP46821 2468 aaKnown RBP15.18■□□□□ 0.02
ATG4B-223ENST00000493618 A0A1B0GTW7 788 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 METTL12A8MUP2 240 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 LUC7L3O95232 432 aaKnown RBP15.17■□□□□ 0.02
ATG4B-223ENST00000493618 IGLV3-19P01714 112 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 CD59P13987 128 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 TACR2P21452 398 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 YWHAZP63104 245 aaKnown RBP15.17■□□□□ 0.02
ATG4B-223ENST00000493618 NNTQ13423 1086 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 CDH18Q13634 790 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 PITRM1Q5JRX3 1037 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 CIR1Q86X95 450 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-223ENST00000493618 DHX40Q8IX18 779 aaKnown RBP15.17■□□□□ 0.02
ATG4B-223ENST00000493618 DEFB106AQ8N104 65 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 MLKLQ8NB16 471 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 CADM4Q8NFZ8 388 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 DNASE2BQ8WZ79 361 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 SHC3Q92529 594 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 MYO19Q96H55 970 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 PPP1R13BQ96KQ4 1090 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms