RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 HS1BP3Q53T59 392 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 FAM72AQ5TYM5 149 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 FAM72DQ6L9T8 149 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 FBXL22Q6P050 247 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 LRRC31Q6UY01 552 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 CYP4V2Q6ZWL3 525 aaPredicted RBP16.28■□□□□ 0.2
HPS4-216ENST00000493455 FAM72BQ86X60 149 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 TMEM25Q86YD3 366 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 RNF135Q8IUD6 432 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 CPA6Q8N4T0 437 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 NAT16Q8N8M0 369 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 KCTD6Q8NC69 237 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 IGSF8Q969P0 613 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 NXPE3Q969Y0 559 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 AZIN2Q96A70 460 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 OTUB2Q96DC9 234 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 TMA16Q96EY4 203 aaKnown RBP16.28■□□□□ 0.2
HPS4-216ENST00000493455 PRICKLE1Q96MT3 831 aaPredicted RBP16.28■□□□□ 0.2
HPS4-216ENST00000493455 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 FAM83CQ9BQN1 747 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 HPS4Q9NQG7 708 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 SPHK2Q9NRA0 654 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 TMEM51Q9NW97 253 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 ZKSCAN5Q9Y2L8 839 aa16.28■□□□□ 0.2
HPS4-216ENST00000493455 EEF2KO00418 725 aaKnown RBP16.27■□□□□ 0.2
HPS4-216ENST00000493455 DAPK3O43293 454 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 ADH1CP00326 375 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 ADH5P11766 374 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 SOX9P48436 509 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 IRAK1P51617 712 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 TPI1P60174 286 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 SCAPQ12770 1279 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 RABGAP1LQ5R372 815 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 NT5DC3Q86UY8 548 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 CCDC50Q8IVM0 306 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 ADGRG2Q8IZP9 1017 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 GJD3Q8N144 294 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 SLC35F6Q8N357 371 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 CPXM2Q8N436 756 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 CARNMT1Q8N4J0 409 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 HJURPQ8NCD3 748 aaPredicted RBP16.27■□□□□ 0.2
HPS4-216ENST00000493455 TRIM58Q8NG06 486 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 KRT35Q92764 455 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 IRF7Q92985 503 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 RNF25Q96BH1 459 aaPredicted RBP16.27■□□□□ 0.2
HPS4-216ENST00000493455 EPAS1Q99814 870 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 PRMT1Q99873 361 aaKnown RBP16.27■□□□□ 0.2
HPS4-216ENST00000493455 CALN1Q9BXU9 219 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 ECT2Q9H8V3 914 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 MPP6Q9NZW5 540 aa16.27■□□□□ 0.2
HPS4-216ENST00000493455 DOCK4Q8N1I0 1966 aa16.27■□□□□ 0.19
HPS4-216ENST00000493455 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
HPS4-216ENST00000493455 C19orf67A6NJJ6 358 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 PSTPIP1O43586 416 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 LRIG2O94898 1065 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 CD48P09326 243 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 GOT1P17174 413 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 L1CAMP32004 1257 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 ARL4AP40617 200 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 NUMBP49757 651 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 MLLT6P55198 1093 aaPredicted RBP16.26■□□□□ 0.19
HPS4-216ENST00000493455 GNG11P61952 73 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 GAD2Q05329 585 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 NR1H3Q13133 447 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 MTA1Q13330 715 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 LLGL1Q15334 1064 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 MPPE1Q53F39 396 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 RHBDF2Q6PJF5 856 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 TFAP2DQ7Z6R9 452 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 TEKT4Q8WW24 435 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 TBC1D31Q96DN5 1066 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 OSBPL2Q9H1P3 480 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 PCDH18Q9HCL0 1135 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.26■□□□□ 0.19
HPS4-216ENST00000493455 STOML2Q9UJZ1 356 aa16.26■□□□□ 0.19
HPS4-216ENST00000493455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
HPS4-216ENST00000493455 SPTBN5Q9NRC6 3674 aaKnown RBP16.26■□□□□ 0.19
HPS4-216ENST00000493455 OTOL1A6NHN0 477 aaPredicted RBP16.25■□□□□ 0.19
HPS4-216ENST00000493455 H3BRJ5 948 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 ENC1O14682 589 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 CNTN5O94779 1100 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 TYRP14679 529 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 EPHB2P29323 1055 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 KDSRQ06136 332 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 MMRN1Q13201 1228 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 POLNQ7Z5Q5 900 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 CCDC117Q8IWD4 279 aaPredicted RBP16.25■□□□□ 0.19
HPS4-216ENST00000493455 FAM217AQ8IXS0 508 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 UBL4BQ8N7F7 174 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 RAPGEF5Q92565 580 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 C1orf74Q96LT6 269 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 PSMB7Q99436 277 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 HEBP1Q9NRV9 189 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
HPS4-216ENST00000493455 MUTYHQ9UIF7 546 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 CA14Q9ULX7 337 aa16.25■□□□□ 0.19
HPS4-216ENST00000493455 SORCS3Q9UPU3 1222 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms