RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 C4BPAP04003 597 aaKnown RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 RARGP13631 454 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 PRKCHP24723 683 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 AFF3P51826 1226 aaKnown RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 SNRPFP62306 86 aaKnown RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 IRX1P78414 480 aaPredicted RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 CEBPZQ03701 1054 aaKnown RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 ZNF234Q14588 700 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 TMEM215Q68D42 235 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 CNNM4Q6P4Q7 775 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 CLEC20AQ6ZU45 233 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 SCD5Q86SK9 330 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 FMNL3Q8IVF7 1028 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 C12orf56Q8IXR9 622 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 ZNF276Q8N554 614 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 UBL7Q96S82 380 aaPredicted RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 PCED1AQ9H1Q7 454 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 C6orf106Q9H6K1 298 aaPredicted RBP13.74□□□□□ -0.21
HDAC3-213ENST00000492506 OSGEPQ9NPF4 335 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 ELOVL2Q9NXB9 296 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 DNMT3LQ9UJW3 386 aa13.74□□□□□ -0.21
HDAC3-213ENST00000492506 UBE4BO95155 1302 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 VPS37CA5D8V6 355 aaPredicted RBP13.73□□□□□ -0.21
HDAC3-213ENST00000492506 KCNK3O14649 394 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 PHACTR2O75167 634 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 MCM3P25205 808 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 ACSL1P33121 698 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 NDST1P52848 882 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 NCOA4Q13772 614 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 SUZ12Q15022 739 aaKnown RBP13.73□□□□□ -0.21
HDAC3-213ENST00000492506 SLC39A14Q15043 492 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 C10orf120Q5SQS8 335 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 FAM124AQ86V42 546 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 CACUL1Q86Y37 369 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 NELFCDQ8IXH7 590 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 PARD3BQ8TEW8 1205 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 SORCS1Q8WY21 1168 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 SPATA32Q96LK8 384 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 FUT8Q9BYC5 575 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 FAM49BQ9NUQ9 324 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 CFAP45Q9UL16 551 aa13.73□□□□□ -0.21
HDAC3-213ENST00000492506 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.73□□□□□ -0.21
HDAC3-213ENST00000492506 ARID1BQ8NFD5 2236 aaPredicted RBP13.72□□□□□ -0.21
HDAC3-213ENST00000492506 USP27XA6NNY8 438 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
HDAC3-213ENST00000492506 E9PAM4 449 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 PCDHGA12O60330 932 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
HDAC3-213ENST00000492506 ITPKBP27987 946 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 GRK6P43250 576 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 KIF11P52732 1056 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 GYS2P54840 703 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 C19orf57Q0VDD7 668 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 BIRC3Q13489 604 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 CAMK2GQ13555 558 aaPredicted RBP13.72□□□□□ -0.21
HDAC3-213ENST00000492506 EIF4HQ15056 248 aaKnown RBP13.72□□□□□ -0.21
HDAC3-213ENST00000492506 KCNT1Q5JUK3 1230 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 DHRS13Q6UX07 377 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 RSRC2Q7L4I2 434 aaKnown RBP13.72□□□□□ -0.21
HDAC3-213ENST00000492506 ANKS1BQ7Z6G8 1248 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 UNC93AQ86WB7 457 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 TWNKQ96RR1 684 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 USP28Q96RU2 1077 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 HNRNPABQ99729 332 aaKnown RBP13.72□□□□□ -0.21
HDAC3-213ENST00000492506 ORAI3Q9BRQ5 295 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 TM9SF3Q9HD45 589 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 ANKRD6Q9Y2G4 727 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
HDAC3-213ENST00000492506 H0Y8X5 98 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 TK2O00142 265 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 ATXN7O15265 892 aaPredicted RBP13.71□□□□□ -0.21
HDAC3-213ENST00000492506 PAPSS1O43252 624 aaPredicted RBP13.71□□□□□ -0.21
HDAC3-213ENST00000492506 FAM200BP0CF97 657 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 ACADMP11310 421 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 ADORA2BP29275 332 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 CHKAP35790 457 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 ASPAP45381 313 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 ABCG1P45844 678 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 GRIA4P48058 902 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 AP3M2P53677 418 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 ASIC1P78348 528 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 LONRF2Q1L5Z9 754 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 E4F1Q66K89 784 aaPredicted RBP13.71□□□□□ -0.21
HDAC3-213ENST00000492506 LAYNQ6UX15 382 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 CEP112Q8N8E3 955 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 OR2T3Q8NH03 318 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 GIMAP7Q8NHV1 300 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 PIP4K2CQ8TBX8 421 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 SLC39A7Q92504 469 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 IGSF8Q969P0 613 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 JAKMIP2Q96AA8 810 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 C7orf25Q9BPX7 421 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.21
HDAC3-213ENST00000492506 PRORYQ9H606 182 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms