RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 CCDC15Q0P6D6 951 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 SMAD1Q15797 465 aaKnown RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 P3H1Q32P28 736 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 FBXO47Q5MNV8 452 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 ATPAF1Q5TC12 328 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 KYAT3Q6YP21 454 aaKnown RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 TRIM72Q6ZMU5 477 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 RAB11FIP2Q7L804 512 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 RASGRP2Q7LDG7 609 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 P3H2Q8IVL5 708 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 CPOQ8IVL8 374 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 FTSJ3Q8IY81 847 aaKnown RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 CPXCR1Q8N123 301 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 EXD3Q8N9H8 876 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 OR52L2PQ8NGH6 319 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 WDR60Q8WVS4 1066 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 PPM1EQ8WY54 764 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 UBXN10Q96LJ8 280 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 SCLT1Q96NL6 688 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 TRAPPC9Q96Q05 1148 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 FAM167BQ9BTA0 163 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 PAGR1Q9BTK6 254 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 ELOVL1Q9BW60 279 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 ELAC1Q9H777 363 aaKnown RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 USP29Q9HBJ7 922 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 SEPSECSQ9HD40 501 aaKnown RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 SAYSD1Q9NPB0 183 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 GGA3Q9NZ52 723 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 KCND3Q9UK17 655 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 TARM1B6A8C7 271 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 H7C1Q1 480 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 FYB1O15117 783 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 EXOC3O60645 756 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 TK1P04183 234 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 CYP3A4P08684 503 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 CYP2D6P10635 497 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 HSD3B1P14060 373 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 IGFBP2P18065 325 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 DUSP1P28562 367 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 MPGP29372 298 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SERPINA4P29622 427 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 JAK3P52333 1124 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 TAS2R50P59544 299 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 WDR5P61964 334 aaKnown RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 HOXA4Q00056 320 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SLC14A1Q13336 389 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 DCTN1Q14203 1278 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 LARS2Q15031 903 aaKnown RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SEC23BQ15437 767 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 PROSER3Q2NL68 480 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 ANKRD40Q6AI12 368 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 DGAT2L7PQ6IED9 249 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SLC18B1Q6NT16 456 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 CEP85Q6P2H3 762 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 LVRNQ6Q4G3 990 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 KIAA1324Q6UXG2 1013 aaKnown RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SYT13Q7L8C5 426 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SLC29A4Q7RTT9 530 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 KRT27Q7Z3Y8 459 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 ZNF804AQ7Z570 1209 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 ANKS1BQ7Z6G8 1248 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 CCDC117Q8IWD4 279 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 LAS2Q8IYD9 372 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 OR6Y1Q8NGX8 325 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SLC2A12Q8TD20 617 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 CLEC4CQ8WTT0 213 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 HMGB4Q8WW32 186 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 IGFBPL1Q8WX77 278 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 HERVK_113Q902F9 699 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 RITA1Q96K30 269 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 HERC2P3Q9BVR0 1158 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 TAF1DQ9H5J8 278 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 CCDC134Q9H6E4 229 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 MLXIPLQ9NP71 852 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 FBXO28Q9NVF7 368 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 TUBA8Q9NY65 449 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 RRN3Q9NYV6 651 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 KIF17Q9P2E2 1029 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 GJD2Q9UKL4 321 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 RAB21Q9UL25 225 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 TRPC5Q9UL62 973 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 NFU1Q9UMS0 254 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 VPS4AQ9UN37 437 aa3.29□□□□□ -1.88
HMGB1P30-201ENST00000492455 SPATA31A1Q5TZJ5 1347 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 AGAP5A6NIR3 686 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 E7EVH7 732 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 CLIC1O00299 241 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 EIF3FO00303 357 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 PPP6CO00743 305 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 NCAM2O15394 837 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 IRAK2O43187 625 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 JTBO76095 146 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 LARGE1O95461 756 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 MMP8P22894 467 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 NDUFS1P28331 727 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 IDUAP35475 653 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 STAT6P42226 847 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 NR4A2P43354 598 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 CCT5P48643 541 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 PPM1FP49593 454 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms