RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BNC1Q01954 994 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF252P-AS1Q0IIN9 211 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 HNRNPDQ14103 355 aaKnown RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 MS4A13Q5J8X5 152 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 MBLAC2Q68D91 279 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 DENND1BQ6P3S1 775 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 KIAA1324Q6UXG2 1013 aaKnown RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 SERPINA13PQ6UXR4 307 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 MINDY1Q8N5J2 469 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF557Q8N988 423 aaPredicted RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 DEFB124Q8NES8 71 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 SHC3Q92529 594 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 PRCCQ92733 491 aaPredicted RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 GATA6Q92908 595 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 MRGPRX3Q96LB0 322 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 PRICKLE1Q96MT3 831 aaPredicted RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 SERPINB11Q96P15 392 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 DDX50Q9BQ39 737 aaKnown RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 ORAI3Q9BRQ5 295 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 TRIM62Q9BVG3 475 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 CIPCQ9C0C6 399 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 RSPH9Q9H1X1 276 aaPredicted RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 LHX5Q9H2C1 402 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 THAP9Q9H5L6 903 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 UBE2TQ9NPD8 197 aaPredicted RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 PCDHGC3Q9UN70 934 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 PLA2G4CQ9UP65 541 aa8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 ATXN2Q99700 1313 aaKnown RBP8.7□□□□□ -1.02
SMARCB1-207ENST00000491967 ARID1BQ8NFD5 2236 aaPredicted RBP8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM208BQ5VWN6 2430 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 KCNU1A8MYU2 1149 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 PIK3R2O00459 728 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 MED7O43513 233 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 TSPAN3O60637 253 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 OPHN1O60890 802 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 TBL1XO60907 577 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 CBFA2T3O75081 653 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 CAPNS1P04632 268 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 CFIP05156 583 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 PROS1P07225 676 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 GLI1P08151 1106 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 HLA-EP13747 358 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 GNSP15586 552 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC9A1P19634 815 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 PON1P27169 355 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 MAOBP27338 520 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 MAPK8P45983 427 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 PLK1P53350 603 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 RPS14P62263 151 aaKnown RBP8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 RPS24P62847 133 aaKnown RBP8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 YWHAZP63104 245 aaKnown RBP8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 ST3GAL2Q16842 350 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 HNRNPA1L2Q32P51 320 aaKnown RBP8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 FSCBQ5H9T9 825 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 TAC4Q86UU9 113 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 MLKLQ8NB16 471 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 HJURPQ8NCD3 748 aaPredicted RBP8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 CYB5D2Q8WUJ1 264 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 ERLEC1Q96DZ1 483 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC2A13Q96QE2 648 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 PRMT1Q99873 361 aaKnown RBP8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 GPR174Q9BXC1 333 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 MIS12Q9H081 205 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC32A1Q9H598 525 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 SIX2Q9NPC8 291 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 ACP6Q9NPH0 428 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 FSCN3Q9NQT6 498 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 ASNSD1Q9NWL6 643 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 APEX2Q9UBZ4 518 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 SUN2Q9UH99 717 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 PLXNB3Q9ULL4 1909 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 ITIH6Q6UXX5 1313 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 CFAP47Q6ZTR5 3102 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 PKD1L2Q7Z442 2459 aa8.69□□□□□ -1.02
SMARCB1-207ENST00000491967 BAHCC1Q9P281 2608 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 PTPRBP23467 1997 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 DOCK4Q8N1I0 1966 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 ZZEF1O43149 2961 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 E5RJQ4 531 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 BCAT2O15382 392 aaPredicted RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 DKK1O94907 266 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 LETM1O95202 739 aaPredicted RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 LUC7L3O95232 432 aaKnown RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 TRUB2O95900 331 aaKnown RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 TOP3BO95985 862 aaKnown RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 ASLP04424 464 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 KRT5P13647 590 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 ACSL1P33121 698 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM193AP78312 1265 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 PITX1P78337 314 aaPredicted RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 GRIK2Q13002 908 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 PDCLQ13371 301 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 UAP1L1Q3KQV9 507 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 PLEKHG6Q3KR16 790 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 C5orf22Q49AR2 442 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 DCAF6Q58WW2 860 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 C9orf64Q5T6V5 341 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms