RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ZNF653Q96CK0 615 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PRMT1Q99873 361 aaKnown RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ISCUQ9H1K1 167 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PARVAQ9NVD7 372 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ZNHIT6Q9NWK9 470 aaKnown RBP16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 STIM2Q9P246 746 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 HS3ST4Q9Y661 456 aa16.85■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PRRT4C9JH25 899 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MYBL1P10243 752 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TDGF1P13385 188 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ZNF75DP51815 510 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ADKP55263 362 aaKnown RBP16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RPL7AP62424 266 aaKnown RBP16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TBX2Q13207 712 aaPredicted RBP16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MAMLD1Q13495 774 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 GEN1Q17RS7 908 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RABGAP1LQ5R372 815 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 EMC10Q5UCC4 262 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PLEKHA7Q6IQ23 1121 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 DCUN1D2Q6PH85 259 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SYT13Q7L8C5 426 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TRMT11Q7Z4G4 463 aaKnown RBP16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 FAM131BQ86XD5 332 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MFN1Q8IWA4 741 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CFAP52Q8N1V2 620 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ZNF513Q8N8E2 541 aaPredicted RBP16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ANLNQ9NQW6 1124 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CNOT8Q9UFF9 292 aaKnown RBP16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MMP17Q9ULZ9 603 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SLC8A2Q9UPR5 921 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 STARD13Q9Y3M8 1113 aa16.84■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 A0A087X0T9 212 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 AKR1B15C9JRZ8 316 aaPredicted RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 K7ESF4 209 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 KLF8O95600 359 aaPredicted RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FAM228BP0C875 321 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 DESP17661 470 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HLA-FP30511 346 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 GGCXP38435 758 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 EIF4A3P38919 411 aaKnown RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZNF143P52747 638 aaPredicted RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 AUHQ13825 339 aaKnown RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 DMC1Q14565 340 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 RAB6CQ53S08 254 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SH3PXD2AQ5TCZ1 1133 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TTC39BQ5VTQ0 682 aaPredicted RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 EGFLAMQ63HQ2 1017 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FBXL22Q6P050 247 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCDC117Q8IWD4 279 aaPredicted RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CARNMT1Q8N4J0 409 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCDC33Q8N5R6 958 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ALLCQ8N6M5 410 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 IL17RCQ8NAC3 791 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 WFDC5Q8TCV5 224 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 WFIKKN2Q8TEU8 576 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FAM172AQ8WUF8 416 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CENPIQ92674 756 aaPredicted RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 MRFAP1L1Q96HT8 127 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SIK2Q9H0K1 926 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 RAB6CQ9H0N0 254 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ABCB8Q9NUT2 735 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 POLR3BQ9NW08 1133 aaPredicted RBP16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 GGA2Q9UJY4 613 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SCINQ9Y6U3 715 aa16.83■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SSU72P8A0A1W2PR75 194 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 I6L893 689 aaPredicted RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCP110O43303 1012 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 LUC7L3O95232 432 aaKnown RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 PABPC1P11940 636 aaKnown RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NRLP54845 237 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HDAC4P56524 1084 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NHLH1Q02575 133 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CDH18Q13634 790 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 EIF4HQ15056 248 aaKnown RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 EOGTQ5NDL2 527 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ACBD5Q5T8D3 534 aaPredicted RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ALKBH5Q6P6C2 394 aaKnown RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TXNDC5Q8NBS9 432 aaKnown RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FIBINQ8TAL6 211 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 UCMAQ8WVF2 138 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 RPRD1AQ96P16 312 aaPredicted RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HAPLN3Q96S86 360 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CNPY3Q9BT09 278 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FAM126AQ9BYI3 521 aaPredicted RBP16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 DEF6Q9H4E7 631 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZDHHC4Q9NPG8 344 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TMPRSS4Q9NRS4 437 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FAM86C1Q9NVL1 165 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 MYO1AQ9UBC5 1043 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HCN2Q9UL51 889 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 VANGL2Q9ULK5 521 aa16.82■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 A0A1B0GVM2 712 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TCAF2A6NFQ2 919 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 H0Y626 953 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SGK1O00141 431 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HNRNPLP14866 589 aaKnown RBP eCLIP16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 E2F5Q15329 346 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms