RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 PHF2O75151 1096 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 ERLIN1O75477 346 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 RARAP10276 462 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 SLC2A3P11169 496 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 PLA2G5P39877 138 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 FNTAP49354 379 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
NUP188-208ENST00000491502 CDH6P55285 790 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 DHX34Q14147 1143 aaKnown RBP13.97□□□□□ -0.17
NUP188-208ENST00000491502 EFHC2Q5JST6 749 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 ACBD5Q5T8D3 534 aaPredicted RBP13.97□□□□□ -0.17
NUP188-208ENST00000491502 TXNDC8Q6A555 127 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 C1orf228Q6PIY5 440 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 ZNF852Q6ZMS4 543 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 PRSS33Q8NF86 280 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 HSPH1Q92598 858 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 RNF34Q969K3 372 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 MAGOHBQ96A72 148 aaKnown RBP13.97□□□□□ -0.17
NUP188-208ENST00000491502 NTAN1Q96AB6 310 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
NUP188-208ENST00000491502 MSANTD3Q96H12 275 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 SERPINB11Q96P15 392 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 KRT12Q99456 494 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 AP1M1Q9BXS5 423 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.97□□□□□ -0.17
NUP188-208ENST00000491502 TDP1Q9NUW8 608 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 TMEM30AQ9NV96 361 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 RCOR3Q9P2K3 495 aaPredicted RBP13.97□□□□□ -0.17
NUP188-208ENST00000491502 DENND4CQ5VZ89 1909 aa13.97□□□□□ -0.17
NUP188-208ENST00000491502 PTPRDP23468 1912 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 NUP210Q8TEM1 1887 aaPredicted RBP13.96□□□□□ -0.17
NUP188-208ENST00000491502 TRAV19A0A0A6YYK7 116 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 FAM92AA1XBS5 289 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 ZNF189O75820 626 aaPredicted RBP13.96□□□□□ -0.17
NUP188-208ENST00000491502 ARL4AP40617 200 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 MAGEA9P43362 315 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 HDAC4P56524 1084 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 IFRD2Q12894 506 aaPredicted RBP13.96□□□□□ -0.17
NUP188-208ENST00000491502 ELF2Q15723 593 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 CCNG2Q16589 344 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 CYP1B1Q16678 543 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 SMTNL2Q2TAL5 461 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 MAP9Q49MG5 647 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 TRNP1Q6NT89 227 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 TPRG1Q6ZUI0 275 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 SYDE1Q6ZW31 735 aaPredicted RBP13.96□□□□□ -0.17
NUP188-208ENST00000491502 BZW1Q7L1Q6 419 aaKnown RBP13.96□□□□□ -0.17
NUP188-208ENST00000491502 CPNE8Q86YQ8 564 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 KLHL7Q8IXQ5 586 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 IFT20Q8IY31 132 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 CCDC105Q8IYK2 499 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 ARFGAP1Q8N6T3 406 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 C12orf50Q8NA57 414 aaPredicted RBP13.96□□□□□ -0.17
NUP188-208ENST00000491502 DTWD2Q8NBA8 298 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 STKLD1Q8NE28 680 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 PJA1Q8NG27 643 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 SCAMP5Q8TAC9 235 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 RSPRY1Q96DX4 576 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 ZNF670Q9BS34 389 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 CALN1Q9BXU9 219 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 RAB17Q9H0T7 212 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 C8orf33Q9H7E9 229 aaPredicted RBP13.96□□□□□ -0.17
NUP188-208ENST00000491502 HEBP1Q9NRV9 189 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 DDIT4Q9NX09 232 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 SLC12A6Q9UHW9 1150 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 NAALADL1Q9UQQ1 740 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 MUC6Q6W4X9 2439 aa13.96□□□□□ -0.17
NUP188-208ENST00000491502 ZNF638Q14966 1978 aaKnown RBP13.95□□□□□ -0.18
NUP188-208ENST00000491502 hCG_1818297A0A087WSY0 165 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 FAM187AA6NFU0 413 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 FAM170BA6NMN3 283 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 PRAMEF12O95522 483 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 GAS8O95995 478 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 RHOXF2BP0C7M4 288 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 IL1R2P27930 398 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 CDKN2BP42772 138 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 TCF15Q12870 199 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 NME3Q13232 169 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 NNTQ13423 1086 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 UBXN2BQ14CS0 331 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 DPYSL2Q16555 572 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 KCNT1Q5JUK3 1230 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 BRMS1LQ5PSV4 323 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 SH3PXD2AQ5TCZ1 1133 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 DAB2IPQ5VWQ8 1189 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 BNIPLQ7Z465 357 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 RFX6Q8HWS3 928 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 ZNF276Q8N554 614 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 NOA1Q8NC60 698 aaKnown RBP13.95□□□□□ -0.18
NUP188-208ENST00000491502 RAPGEF5Q92565 580 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 NDRG1Q92597 394 aaKnown RBP13.95□□□□□ -0.18
NUP188-208ENST00000491502 USP13Q92995 863 aaPredicted RBP13.95□□□□□ -0.18
NUP188-208ENST00000491502 LRRC3BQ96PB8 259 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 RHOXF2Q9BQY4 288 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 WDCPQ9H6R7 721 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 LRRC19Q9H756 370 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 LTB4R2Q9NPC1 389 aa13.95□□□□□ -0.18
NUP188-208ENST00000491502 SMARCAL1Q9NZC9 954 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms