RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 DAAM1Q9Y4D1 1078 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 KCNJ18B7U540 433 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 OPHN1O60890 802 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 TRUB2O95900 331 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 HLA-FP30511 346 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 NOVA1P51513 510 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 SLC12A1Q13621 1099 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 KCNJ12Q14500 433 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 ACBD5Q5T8D3 534 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 IRF2BP1Q8IU81 584 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 DEFB119Q8N690 84 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 C1orf131Q8NDD1 294 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 GPT2Q8TD30 523 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 ZNF419Q96HQ0 510 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 ZDHHC5Q9C0B5 715 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 HCN2Q9UL51 889 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 STAP1Q9ULZ2 295 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 SCML1Q9UN30 329 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 NFE2L3Q9Y4A8 694 aa17.17■□□□□ 0.34
PDLIM2-217ENST00000491330 PAPSS1O43252 624 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 KCNK5O95279 499 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 CALCAP01258 141 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 CEACAM1P13688 526 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 ENGP17813 658 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 CSRP1P21291 193 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 MAPK8P45983 427 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 SULT2A1Q06520 285 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 HNRNPDQ14103 355 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 PLEKHG6Q3KR16 790 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 MS4A13Q5J8X5 152 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 GJB7Q6PEY0 223 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 TAC4Q86UU9 113 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 LGI2Q8N0V4 545 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 FRMD1Q8N878 549 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 KDM1BQ8NB78 822 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 ADAM32Q8TC27 787 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 GANCQ8TET4 914 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 TOE1Q96GM8 510 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 FCRL2Q96LA5 508 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 RXFP3Q9NSD7 469 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 DDIT4Q9NX09 232 aa17.16■□□□□ 0.34
PDLIM2-217ENST00000491330 CEP250Q9BV73 2442 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 GOLGA6L7A0A1B0GV03 622 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 KCNU1A8MYU2 1149 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 PATE3B3GLJ2 98 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 ARHGAP33O14559 1287 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 F9P00740 461 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 TPMTP51580 245 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 CAMK2GQ13555 558 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 STX1AQ16623 288 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 FAM133BQ5BKY9 247 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 ZC3H12AQ5D1E8 599 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 SYPL2Q5VXT5 272 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 PEAR1Q5VY43 1037 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 ZNF776Q68DI1 518 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 PASD1Q8IV76 773 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 CYB5D2Q8WUJ1 264 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 SORCS1Q8WY21 1168 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 SLC39A13Q96H72 371 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 GPR174Q9BXC1 333 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 BTBD1Q9H0C5 482 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 MIR1-1HGQ9H1L0 117 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 WSB2Q9NYS7 404 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 USP36Q9P275 1121 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 ANGPTL2Q9UKU9 493 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 CLEC4EQ9ULY5 219 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 CFAP54Q96N23 3096 aa17.15■□□□□ 0.34
PDLIM2-217ENST00000491330 SYNJ2BP-COX16A0A087WUM0 186 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 A0A1B0GTW7 788 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 FOXN3O00409 490 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 GABBR2O75899 941 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 LUC7L3O95232 432 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 SRPRAP08240 638 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 TACR2P21452 398 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 PRKCHP24723 683 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 NOS2P35228 1153 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC6A3Q01959 620 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 TCP11X2Q5H9J9 407 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 PSAPL1Q6NUJ1 521 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 IL27RAQ6UWB1 636 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 KIAA0907Q7Z7F0 614 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 ADIPOR2Q86V24 386 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 ERICH1Q86X53 443 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 DEFB106AQ8N104 65 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 SKA1Q96BD8 255 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 MKRN2Q9H000 416 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 NAT10Q9H0A0 1025 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 TMEM245Q9H330 911 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 TMEM74BQ9NUR3 256 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 COX16Q9P0S2 106 aa17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 ATXN2Q99700 1313 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-217ENST00000491330 BECN2A8MW95 431 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 TM4SF5O14894 197 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 FYNP06241 537 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC6A4P31645 630 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 CD70P32970 193 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 RPS24P62847 133 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 NME3Q13232 169 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms