RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 PI4K2BG5E9Z4 385 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 EEF2KO00418 725 aaKnown RBP19.24■□□□□ 0.67
MCF2L-230ENST00000491028 CES2O00748 559 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 KCNK3O14649 394 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 FANCGO15287 622 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 LRIG2O94898 1065 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 PRLRP16471 622 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 HOXC13P31276 330 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 PTPN7P35236 360 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 GGCXP38435 758 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 HCAR3P49019 387 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 TPI1P60174 286 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 FCHO2Q0JRZ9 810 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 HTR4Q13639 388 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 PPP2R5EQ16537 467 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 C5orf22Q49AR2 442 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 RABGAP1LQ5R372 815 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 SEL1L2Q5TEA6 688 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 TTC39BQ5VTQ0 682 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-230ENST00000491028 FBXL22Q6P050 247 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 PARM1Q6UWI2 310 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 VITQ6UXI7 678 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 SPOCD1Q6ZMY3 1216 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 CCDC50Q8IVM0 306 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 ZNF683Q8IZ20 524 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 OSCP1Q8WVF1 389 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 TSC1Q92574 1164 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 NXPE3Q969Y0 559 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 RNF25Q96BH1 459 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-230ENST00000491028 FAF2Q96CS3 445 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 CALN1Q9BXU9 219 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 MAGEB5Q9BZ81 275 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 SNX10Q9Y5X0 201 aa19.24■□□□□ 0.67
MCF2L-230ENST00000491028 GOLGA6L7A0A1B0GV03 622 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 TYW5A2RUC4 315 aaKnown RBP19.23■□□□□ 0.67
MCF2L-230ENST00000491028 FAM72CH0Y354 149 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 GFRA2O00451 464 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 FGF10O15520 208 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-230ENST00000491028 CREB3O43889 395 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 CD48P09326 243 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 PYGMP11217 842 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 SLC6A4P31645 630 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 IFNAR2P48551 515 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 TAZQ16635 292 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 TFDP3Q5H9I0 405 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 FAM72AQ5TYM5 149 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 DCAF12L1Q5VU92 463 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 FAM72DQ6L9T8 149 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 MFSD7Q6UXD7 560 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 FAM72BQ86X60 149 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 LGI2Q8N0V4 545 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 FGF14Q92915 247 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 PBKQ96KB5 322 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 LRRC3BQ96PB8 259 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 OSBPL9Q96SU4 736 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 RETREG1Q9H6L5 497 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 PRDM16Q9HAZ2 1276 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 PRDM6Q9NQX0 595 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 DUS2Q9NX74 493 aaKnown RBP19.23■□□□□ 0.67
MCF2L-230ENST00000491028 CWC15Q9P013 229 aaKnown RBP19.23■□□□□ 0.67
MCF2L-230ENST00000491028 VANGL2Q9ULK5 521 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 NEU3Q9UQ49 428 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 EFR3BQ9Y2G0 817 aa19.23■□□□□ 0.67
MCF2L-230ENST00000491028 DRGXA6NNA5 263 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 SCAMP3O14828 347 aaKnown RBP19.22■□□□□ 0.67
MCF2L-230ENST00000491028 GOT1P17174 413 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 PSMC3P17980 439 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 SP100P23497 879 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-230ENST00000491028 CDKN2BP42772 138 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 TFF2Q03403 129 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 PDGFRLQ15198 375 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 ARTNQ5T4W7 220 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 RFWD3Q6PCD5 774 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 RFX8Q6ZV50 586 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 C14orf80Q86SX3 495 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 YAF2Q8IY57 180 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 HJURPQ8NCD3 748 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-230ENST00000491028 PRICKLE1Q96MT3 831 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-230ENST00000491028 RPRD1AQ96P16 312 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-230ENST00000491028 CSPG4P5Q96PW8 444 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 PSMB7Q99436 277 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 KXD1Q9BQD3 176 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 CATSPERBQ9H7T0 1116 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 STIM2Q9P246 746 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 SAR1BQ9Y6B6 198 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 WNT6Q9Y6F9 365 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 NUMBLQ9Y6R0 609 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 DOCK4Q8N1I0 1966 aa19.22■□□□□ 0.67
MCF2L-230ENST00000491028 hCG_1818297A0A087WSY0 165 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 DAPK3O43293 454 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 SRGAP2O75044 1071 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 NFATC1O95644 943 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 CYBBP04839 570 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 IL9P15248 144 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 IL4RP24394 825 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 EPHB2P29323 1055 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 AMPD2Q01433 879 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 ZNF211Q13398 564 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-230ENST00000491028 DPYSQ14117 519 aa19.21■□□□□ 0.67
MCF2L-230ENST00000491028 MPPE1Q53F39 396 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms