RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MFSD7Q6UXD7 560 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 RFX8Q6ZV50 586 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 RASGEF1CQ8N431 466 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 TDRD5Q8NAT2 981 aaKnown RBP13.68□□□□□ -0.22
SNX12-205ENST00000490561 ACTRT1Q8TDG2 376 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 BPIFB1Q8TDL5 484 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 DEPDC1BQ8WUY9 529 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
SNX12-205ENST00000490561 ELSPBP1Q96BH3 223 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 MYADMQ96S97 322 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 PRMT1Q99873 361 aaKnown RBP13.68□□□□□ -0.22
SNX12-205ENST00000490561 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 ANLNQ9NQW6 1124 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 KLHL11Q9NVR0 708 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 CDH22Q9UJ99 828 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 CCL26Q9Y258 94 aa13.68□□□□□ -0.22
SNX12-205ENST00000490561 HELZP42694 1942 aaKnown RBP13.68□□□□□ -0.22
SNX12-205ENST00000490561 IGLV3-10A0A075B6K4 115 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 hCG_1818297A0A087WSY0 165 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 GRXCR2A6NFK2 248 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 C3orf70A6NLC5 250 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 DRGXA6NNA5 263 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 PI4K2BG5E9Z4 385 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 I6L893 689 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 PGRMC1O00264 195 aaKnown RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 LRIG2O94898 1065 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 CYBBP04839 570 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 SERPINB6P35237 376 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 PAFAH1B1P43034 410 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 IFNAR2P48551 515 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 ZXDBP98169 803 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 CKAP4Q07065 602 aaKnown RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 PDGFRLQ15198 375 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 SMAD2Q15796 467 aaKnown RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 WHAMMP3Q1A5X7 153 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 DCAF12L1Q5VU92 463 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 RAP1GAP2Q684P5 730 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 RFX6Q8HWS3 928 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 YAF2Q8IY57 180 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 ZNF557Q8N988 423 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 HJURPQ8NCD3 748 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 MAFAQ8NHW3 353 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 NXPE3Q969Y0 559 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 RPRD1AQ96P16 312 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 CSPG4P5Q96PW8 444 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 RNF157Q96PX1 679 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 PSMB7Q99436 277 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 FRMD8P1Q9BZ68 369 aaPredicted RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 ZYG11BQ9C0D3 744 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 SMG9Q9H0W8 520 aaKnown RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 CWC15Q9P013 229 aaKnown RBP13.67□□□□□ -0.22
SNX12-205ENST00000490561 CDC23Q9UJX2 597 aa13.67□□□□□ -0.22
SNX12-205ENST00000490561 HEPACAM2A8MVW5 462 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 WASH4PA8MWX3 477 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 APOL1O14791 398 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 FANCGO15287 622 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 CLDN11O75508 207 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 ZNF189O75820 626 aaPredicted RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 URI1O94763 535 aaPredicted RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 SLC34A2O95436 690 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 RHOQP17081 205 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 GOT1P17174 413 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 TGM2P21980 687 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 FCARP24071 287 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 EPHB2P29323 1055 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 CXCR5P32302 372 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 ZNF211Q13398 564 aaPredicted RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 DPYSQ14117 519 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 AAK1Q2M2I8 961 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 MPPE1Q53F39 396 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 MPP7Q5T2T1 576 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 RWDD4Q6NW29 188 aaKnown RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 FBXL22Q6P050 247 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 BBS12Q6ZW61 710 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 BZW1Q7L1Q6 419 aaKnown RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 CHST9Q7L1S5 443 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 CCDC117Q8IWD4 279 aaPredicted RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 MFSD6LQ8IWD5 586 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 BBS7Q8IWZ6 715 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 PYROXD2Q8N2H3 581 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 LZTR1Q8N653 840 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 TTC13Q8NBP0 860 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 OSCP1Q8WVF1 389 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 TMPRSS4Q9NRS4 437 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 HOMER3Q9NSC5 361 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 XPO7Q9UIA9 1087 aaKnown RBP13.66□□□□□ -0.22
SNX12-205ENST00000490561 VANGL2Q9ULK5 521 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 RAD54BQ9Y620 910 aa13.66□□□□□ -0.22
SNX12-205ENST00000490561 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 A0A1B0GVM2 712 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 TCAF2A6NFQ2 919 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 FAM72CH0Y354 149 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms