RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CYP8B1Q9UNU6 501 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 DNAH14Q0VDD8 3507 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 SYNCRIPO60506 623 aaKnown RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 ZNF217O75362 1048 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 CD70P32970 193 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 ATXN1P54253 815 aaKnown RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 POLR2FP61218 127 aaKnown RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 RPS24P62847 133 aaKnown RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 EIF4EBP2Q13542 120 aaPredicted RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 FNDC3BQ53EP0 1204 aaKnown RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 MBLAC2Q68D91 279 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 SLC36A4Q6YBV0 504 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 ARMCX6Q7L4S7 300 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 ADIPOR2Q86V24 386 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 TMEFF1Q8IYR6 380 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 LGI2Q8N0V4 545 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 CARNMT1Q8N4J0 409 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 EPS8L1Q8TE68 723 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 CYB5D2Q8WUJ1 264 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 DDX1Q92499 740 aaKnown RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMC4-222ENST00000490207 SIK3Q9Y2K2 1263 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 DAAM1Q9Y4D1 1078 aa20.47■□□□□ 0.87
SMC4-222ENST00000490207 NYNRINQ9P2P1 1898 aaKnown RBP20.47■□□□□ 0.87
SMC4-222ENST00000490207 IGHV1OR15-9A0A0B4J2B8 117 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 LGALS16A8MUM7 142 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 GFPT2O94808 682 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 LSM8O95777 96 aaKnown RBP20.46■□□□□ 0.87
SMC4-222ENST00000490207 EPHX1P07099 455 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 SLC2A3P11169 496 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 CDK11BP21127 795 aaKnown RBP20.46■□□□□ 0.87
SMC4-222ENST00000490207 TACR2P21452 398 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 RPL6Q02878 288 aaKnown RBP20.46■□□□□ 0.87
SMC4-222ENST00000490207 LMAN2Q12907 356 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 CDH18Q13634 790 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 NCAPHQ15003 741 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 TCEAL6Q6IPX3 200 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 CCDC117Q8IWD4 279 aaPredicted RBP20.46■□□□□ 0.87
SMC4-222ENST00000490207 AOPEPQ8N6M6 819 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 MSANTD4Q8NCY6 345 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 ZNF397Q8NF99 534 aaPredicted RBP20.46■□□□□ 0.87
SMC4-222ENST00000490207 TCEAL3Q969E4 200 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 RNF34Q969K3 372 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 NLRC4Q9NPP4 1024 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 CD93Q9NPY3 652 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 SLC12A6Q9UHW9 1150 aa20.46■□□□□ 0.87
SMC4-222ENST00000490207 FAM170AA1A519 330 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 KCNU1A8MYU2 1149 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 F5H5T6 163 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 SLC30A4O14863 429 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 EPHB6O15197 1021 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 AP5Z1O43299 807 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 LUC7L3O95232 432 aaKnown RBP20.45■□□□□ 0.86
SMC4-222ENST00000490207 MMEP08473 750 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 HLA-EP13747 358 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 ZNF18P17022 549 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 POLR2EP19388 210 aaKnown RBP20.45■□□□□ 0.86
SMC4-222ENST00000490207 ABCB4P21439 1286 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 CCR1P32246 355 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 NOS2P35228 1153 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 GABRB2P47870 512 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 JAM2P57087 298 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 SYCP1Q15431 976 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 SPDYCQ5MJ68 293 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 LYSMD4Q5XG99 296 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 ERICH1Q86X53 443 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 ZNF677Q86XU0 584 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 CFAP52Q8N1V2 620 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 FIBINQ8TAL6 211 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 PIGKQ92643 395 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 C18orf8Q96DM3 657 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 PCMTD1Q96MG8 357 aaPredicted RBP20.45■□□□□ 0.86
SMC4-222ENST00000490207 SPAG5Q96R06 1193 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 MKRN2Q9H000 416 aaKnown RBP20.45■□□□□ 0.86
SMC4-222ENST00000490207 PRDM16Q9HAZ2 1276 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 RXFP3Q9NSD7 469 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 PLA2G4CQ9UP65 541 aa20.45■□□□□ 0.86
SMC4-222ENST00000490207 ATP5BP06576 529 aaKnown RBP20.44■□□□□ 0.86
SMC4-222ENST00000490207 SOX5P35711 763 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 MATKP42679 507 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 PTGER3P43115 390 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 NOMO3P69849 1222 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 FOXK2Q01167 660 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 UBXN1Q04323 297 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 NME3Q13232 169 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 PTPRNQ16849 979 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 ANO6Q4KMQ2 910 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 FAM102AQ5T9C2 384 aaPredicted RBP20.44■□□□□ 0.86
SMC4-222ENST00000490207 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
SMC4-222ENST00000490207 XYLT1Q86Y38 959 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 NEK11Q8NG66 645 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 SLC20A1Q8WUM9 679 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 LMLNQ96KR4 655 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 NAT10Q9H0A0 1025 aaKnown RBP20.44■□□□□ 0.86
SMC4-222ENST00000490207 HSD3B7Q9H2F3 369 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 RRN3Q9NYV6 651 aa20.44■□□□□ 0.86
SMC4-222ENST00000490207 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMC4-222ENST00000490207 NOCTQ9UK39 431 aaKnown RBP20.44■□□□□ 0.86
SMC4-222ENST00000490207 STAP1Q9ULZ2 295 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms