RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DDI1Q8WTU0 396 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 TSC1Q92574 1164 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 FAXDC2Q96IV6 333 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 ELF4Q99607 663 aaPredicted RBP8.56□□□□□ -1.04
USP39-216ENST00000490193 ACE2Q9BYF1 805 aaPredicted RBP8.56□□□□□ -1.04
USP39-216ENST00000490193 IMPG2Q9BZV3 1241 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 NRSN2Q9GZP1 204 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 DNAI2Q9GZS0 605 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 NIF3L1Q9GZT8 377 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 KCTD10Q9H3F6 313 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 APOBEC3GQ9HC16 384 aaKnown RBP8.56□□□□□ -1.04
USP39-216ENST00000490193 PRSS16Q9NQE7 514 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 SCML1Q9UN30 329 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 PLA2G4CQ9UP65 541 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
USP39-216ENST00000490193 A0A1W2PPC4 97 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 SLC12A8A0AV02 714 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 PDXKO00764 312 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 KCNK3O14649 394 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 YKT6O15498 198 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 RRP8O43159 456 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 KLRC4O43908 158 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 RFPL3O75679 317 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 FSBPO95073 299 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 DLDP09622 509 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 PLA2G2AP14555 144 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 JUPP14923 745 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 CASP1P29466 404 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 ACADVLP49748 655 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 YWHAGP61981 247 aaKnown RBP eCLIP8.55□□□□□ -1.04
USP39-216ENST00000490193 CUL4BQ13620 913 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 SHBQ15464 509 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 MPP7Q5T2T1 576 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 ZNF776Q68DI1 518 aaPredicted RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 KIAA0895LQ68EN5 471 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 FBXL19Q6PCT2 694 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 LRRC69Q6ZNQ3 347 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 CHST9Q7L1S5 443 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 RSRC2Q7L4I2 434 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 BHLHA9Q7RTU4 235 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 ADAT2Q7Z6V5 191 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 ZC3H3Q8IXZ2 948 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 TTC39CQ8N584 583 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 KIAA0895Q8NCT3 520 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 SAP25Q8TEE9 199 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 CYB5D2Q8WUJ1 264 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 SKA1Q96BD8 255 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 INTS4Q96HW7 963 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 ARID3AQ99856 593 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 RSPH9Q9H1X1 276 aaPredicted RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 BLZF1Q9H2G9 400 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 UPF2Q9HAU5 1272 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 OLA1Q9NTK5 396 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 ABCB8Q9NUT2 735 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 SUN2Q9UH99 717 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 GGA2Q9UJY4 613 aa8.55□□□□□ -1.04
USP39-216ENST00000490193 HBS1LQ9Y450 684 aaKnown RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 ARID1BQ8NFD5 2236 aaPredicted RBP8.55□□□□□ -1.04
USP39-216ENST00000490193 TEX51A0A1B0GUA7 166 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 CAPN8A6NHC0 703 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 POLR2DO15514 142 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 LDOC1O95751 146 aaPredicted RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 NR3C1P04150 777 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 WNT1P04628 370 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 ATP5BP06576 529 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 SLFN14P0C7P3 912 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 PABPC1P11940 636 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 HARS2P49590 506 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 C21orf59P57076 290 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 IL9RQ01113 521 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 SFSWAPQ12872 951 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 STK4Q13043 487 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 TARDBPQ13148 414 aaKnown RBP eCLIP8.54□□□□□ -1.04
USP39-216ENST00000490193 ILKQ13418 452 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 NFIL3Q16649 462 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 CCDC157Q569K6 752 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 ADGRF1Q5T601 910 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 SFMBT2Q5VUG0 894 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 MBLAC2Q68D91 279 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 ARHGAP17Q68EM7 881 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 PIGZQ86VD9 579 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 ZNF843Q8N446 348 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 ZNF366Q8N895 744 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 ZNF557Q8N988 423 aaPredicted RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 KDM1BQ8NB78 822 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 TAS1R2Q8TE23 839 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 RFFLQ8WZ73 363 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 BAP1Q92560 729 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 TMA16Q96EY4 203 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 MYO19Q96H55 970 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 CNDP2Q96KP4 475 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 SLC6A18Q96N87 628 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 FCRL3Q96P31 734 aaPredicted RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 PABPC3Q9H361 631 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 ADAMTS1Q9UHI8 967 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 FZD4Q9ULV1 537 aa8.54□□□□□ -1.04
USP39-216ENST00000490193 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
USP39-216ENST00000490193 TRAF3IP3Q9Y228 551 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms