RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 LIMA1Q9UHB6 759 aaKnown RBP25.91■■□□□ 1.74
HMGN1-217ENST00000489072 SIK3Q9Y2K2 1263 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 ZBTB24O43167 697 aaPredicted RBP25.9■■□□□ 1.74
HMGN1-217ENST00000489072 ZNF18P17022 549 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 FKBP15Q5T1M5 1219 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 RAP1GAP2Q684P5 730 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 ARMCX6Q7L4S7 300 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 MFN1Q8IWA4 741 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 AHI1Q8N157 1196 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 CFAP52Q8N1V2 620 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 BTN2A3PQ96KV6 586 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 MKRN2Q9H000 416 aaKnown RBP25.9■■□□□ 1.74
HMGN1-217ENST00000489072 PDCL3Q9H2J4 239 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 FAM207AQ9NSI2 230 aaPredicted RBP25.9■■□□□ 1.74
HMGN1-217ENST00000489072 DDIT4Q9NX09 232 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 CYP8B1Q9UNU6 501 aa25.9■■□□□ 1.74
HMGN1-217ENST00000489072 SYNJ2BP-COX16A0A087WUM0 186 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 SLC30A4O14863 429 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 DAB1O75553 588 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 TPM2P07951 284 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 HLA-EP13747 358 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 TACR2P21452 398 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 SNX16P57768 344 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 POLR2FP61218 127 aaKnown RBP25.89■■□□□ 1.74
HMGN1-217ENST00000489072 ARID5AQ03989 594 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 TYRO3Q06418 890 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 PTPRNQ16849 979 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 MBLAC2Q68D91 279 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 KIAA1324Q6UXG2 1013 aaKnown RBP25.89■■□□□ 1.74
HMGN1-217ENST00000489072 SERPINA13PQ6UXR4 307 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 LGI2Q8N0V4 545 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 ZNF397Q8NF99 534 aaPredicted RBP25.89■■□□□ 1.74
HMGN1-217ENST00000489072 FIBINQ8TAL6 211 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 EPS8L1Q8TE68 723 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 RTKNQ9BST9 563 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.89■■□□□ 1.74
HMGN1-217ENST00000489072 COX16Q9P0S2 106 aa25.89■■□□□ 1.74
HMGN1-217ENST00000489072 KCNU1A8MYU2 1149 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 ZNF217O75362 1048 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 EPHX1P07099 455 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 MMEP08473 750 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 GABRB2P47870 512 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 JAM2P57087 298 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 LMAN2Q12907 356 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 E2F5Q15329 346 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 OTUD1Q5VV17 481 aaPredicted RBP25.88■■□□□ 1.73
HMGN1-217ENST00000489072 APTXQ7Z2E3 356 aaKnown RBP25.88■■□□□ 1.73
HMGN1-217ENST00000489072 CHSY1Q86X52 802 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 CARNMT1Q8N4J0 409 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 DEFB119Q8N690 84 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 ATP6V0D2Q8N8Y2 350 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 PIGKQ92643 395 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 PRMT1Q99873 361 aaKnown RBP25.88■■□□□ 1.73
HMGN1-217ENST00000489072 ADAM33Q9BZ11 813 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 TMEM245Q9H330 911 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 PRDM16Q9HAZ2 1276 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 NLRC4Q9NPP4 1024 aa25.88■■□□□ 1.73
HMGN1-217ENST00000489072 NOCTQ9UK39 431 aaKnown RBP25.88■■□□□ 1.73
HMGN1-217ENST00000489072 INTS6Q9UL03 887 aaKnown RBP25.88■■□□□ 1.73
HMGN1-217ENST00000489072 TYW5A2RUC4 315 aaKnown RBP25.87■■□□□ 1.73
HMGN1-217ENST00000489072 DCDC2BA2VCK2 349 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 LGALS16A8MUM7 142 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 PATE3B3GLJ2 98 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 SYNCRIPO60506 623 aaKnown RBP25.87■■□□□ 1.73
HMGN1-217ENST00000489072 GFPT2O94808 682 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 COPAP53621 1224 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 RPL6Q02878 288 aaKnown RBP25.87■■□□□ 1.73
HMGN1-217ENST00000489072 SYCP1Q15431 976 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 FNDC3BQ53EP0 1204 aaKnown RBP25.87■■□□□ 1.73
HMGN1-217ENST00000489072 FSCBQ5H9T9 825 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 SPDYCQ5MJ68 293 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 SLC36A4Q6YBV0 504 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 ZDHHC17Q8IUH5 632 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 ZNF366Q8N895 744 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 SLC20A1Q8WUM9 679 aa25.87■■□□□ 1.73
HMGN1-217ENST00000489072 LSM8O95777 96 aaKnown RBP25.86■■□□□ 1.73
HMGN1-217ENST00000489072 DLDP09622 509 aaKnown RBP25.86■■□□□ 1.73
HMGN1-217ENST00000489072 NOS2P35228 1153 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 LIMK1P53667 647 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 C2CD6Q53TS8 623 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 MMS22LQ6ZRQ5 1243 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 METTL3Q86U44 580 aaKnown RBP25.86■■□□□ 1.73
HMGN1-217ENST00000489072 XYLT1Q86Y38 959 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 TMPRSS6Q8IU80 811 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 AOPEPQ8N6M6 819 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 ZNF557Q8N988 423 aaPredicted RBP25.86■■□□□ 1.73
HMGN1-217ENST00000489072 C18orf8Q96DM3 657 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 TMEM74BQ9NUR3 256 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 PLA2G4CQ9UP65 541 aa25.86■■□□□ 1.73
HMGN1-217ENST00000489072 LRRC10BA6NIK2 292 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 AP5Z1O43299 807 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 LUC7L3O95232 432 aaKnown RBP25.85■■□□□ 1.73
HMGN1-217ENST00000489072 SLC2A3P11169 496 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 POLR2EP19388 210 aaKnown RBP25.85■■□□□ 1.73
HMGN1-217ENST00000489072 TFE3P19532 575 aaPredicted RBP25.85■■□□□ 1.73
HMGN1-217ENST00000489072 ITPKAP23677 461 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 CCR1P32246 355 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 SOX5P35711 763 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 MATKP42679 507 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 RNASE9P60153 205 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms