RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 PQLC3Q8N755 202 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 SH3RF2Q8TEC5 729 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 MAIP1Q8WWC4 291 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 FGF13Q92913 245 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 CAPZA3Q96KX2 299 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 NECTIN4Q96NY8 510 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 SIK2Q9H0K1 926 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 SLITRK6Q9H5Y7 841 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 TRPV4Q9HBA0 871 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 PPARGC1AQ9UBK2 798 aaKnown RBP16.55■□□□□ 0.24
CLDN11-208ENST00000488989 CD207Q9UJ71 328 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 LSM7Q9UK45 103 aaKnown RBP16.55■□□□□ 0.24
CLDN11-208ENST00000488989 MYOFQ9NZM1 2061 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 DRGXA6NNA5 263 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 WASH4PA8MWX3 477 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 E9PAM4 449 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 EEF2KO00418 725 aaKnown RBP16.54■□□□□ 0.24
CLDN11-208ENST00000488989 DCLK1O15075 740 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 CREB3O43889 395 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 TJP3O95049 919 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 PRAMEF12O95522 483 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 IRF1P10914 325 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 TACR2P21452 398 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 TPI1P60174 286 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 ADCY2Q08462 1091 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 AUHQ13825 339 aaKnown RBP16.54■□□□□ 0.24
CLDN11-208ENST00000488989 TFDP2Q14188 446 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 CBX2Q14781 532 aaPredicted RBP16.54■□□□□ 0.24
CLDN11-208ENST00000488989 LONRF2Q1L5Z9 754 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 ADGRF1Q5T601 910 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 CCDC181Q5TID7 509 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 RFX8Q6ZV50 586 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 DENND1CQ8IV53 801 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 ZDHHC14Q8IZN3 488 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 RIN3Q8TB24 985 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 ZSCAN18Q8TBC5 510 aaPredicted RBP16.54■□□□□ 0.24
CLDN11-208ENST00000488989 TBC1D31Q96DN5 1066 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 ASB16Q96NS5 453 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 DDX50Q9BQ39 737 aaKnown RBP16.54■□□□□ 0.24
CLDN11-208ENST00000488989 RETREG1Q9H6L5 497 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 ARHGEF4Q9NR80 690 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 OBP2AQ9NY56 170 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 SMARCAL1Q9NZC9 954 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 CFAP97Q9P2B7 532 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 CDH7Q9ULB5 785 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 CCL26Q9Y258 94 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 SH3BP1Q9Y3L3 701 aa16.54■□□□□ 0.24
CLDN11-208ENST00000488989 SZT2Q5T011 3432 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 TCRBV7S2A1N4TA0A589 114 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 ZFXP17010 805 aaPredicted RBP16.53■□□□□ 0.24
CLDN11-208ENST00000488989 SLC6A4P31645 630 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 GGCXP38435 758 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 KAZNQ674X7 775 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 RAP1GAP2Q684P5 730 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 FBXL22Q6P050 247 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 GET4Q7L5D6 327 aaPredicted RBP16.53■□□□□ 0.24
CLDN11-208ENST00000488989 CHSY1Q86X52 802 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 RFX6Q8HWS3 928 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 CPXM2Q8N436 756 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 DEFB123Q8N688 67 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 CELF5Q8N6W0 485 aaKnown RBP16.53■□□□□ 0.24
CLDN11-208ENST00000488989 PLD5Q8N7P1 536 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 CEP112Q8N8E3 955 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 SMARCD2Q92925 531 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 HEMGNQ9BXL5 484 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 MAK16Q9BXY0 300 aaKnown RBP16.53■□□□□ 0.24
CLDN11-208ENST00000488989 SMG9Q9H0W8 520 aaKnown RBP16.53■□□□□ 0.24
CLDN11-208ENST00000488989 POMKQ9H5K3 350 aa16.53■□□□□ 0.24
CLDN11-208ENST00000488989 ZFP37Q9Y6Q3 630 aaPredicted RBP16.53■□□□□ 0.24
CLDN11-208ENST00000488989 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 F5H5T6 163 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 APOL1O14791 398 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 FGF10O15520 208 aaPredicted RBP16.52■□□□□ 0.24
CLDN11-208ENST00000488989 CST8O60676 142 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 FOSL2P15408 326 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 ERCC2P18074 760 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 TGM2P21980 687 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 AMPD1P23109 780 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 EPHB2P29323 1055 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 PAFAH1B3Q15102 231 aaKnown RBP16.52■□□□□ 0.24
CLDN11-208ENST00000488989 LLGL1Q15334 1064 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 CYP1B1Q16678 543 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 FAM78AQ5JUQ0 283 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 NCBP2-AS2Q69YL0 99 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 LRRC31Q6UY01 552 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 EP400NLQ6ZTU2 488 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 NLRP14Q86W24 1093 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 MYADMQ96S97 322 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 CATSPERBQ9H7T0 1116 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 UBE2ZQ9H832 354 aaPredicted RBP16.52■□□□□ 0.24
CLDN11-208ENST00000488989 STIM2Q9P246 746 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 VANGL2Q9ULK5 521 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 NR2E1Q9Y466 385 aa16.52■□□□□ 0.24
CLDN11-208ENST00000488989 APOC4-APOC2K7ER74 178 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 APOC2P02655 101 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 RHOQP17081 205 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 FCARP24071 287 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 PRELID2Q8N945 189 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 C12orf50Q8NA57 414 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms