RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 GPR18Q14330 331 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 CNGA2Q16280 664 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 KIAA1755Q5JYT7 1200 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 WBP2NLQ6ICG8 309 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 ZBTB34Q8NCN2 500 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 OR52L2PQ8NGH6 319 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 PMM1Q92871 262 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 HOOK2Q96ED9 719 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 TAAR9Q96RI9 348 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 C1QTNF4Q9BXJ3 329 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 SLC25A32Q9H2D1 315 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 TBC1D14Q9P2M4 693 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 TPCN1Q9ULQ1 816 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 MAGED2Q9UNF1 606 aaPredicted RBP3.16□□□□□ -1.9
CCDC93-209ENST00000488908 CFAP69A5D8W1 941 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 FRS3O43559 492 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 SERPINB2P05120 415 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 ARSBP15848 533 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 CARSP49589 748 aaKnown RBP3.15□□□□□ -1.91
CCDC93-209ENST00000488908 ABATP80404 500 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 FMO1Q01740 532 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 TRAF2Q12933 501 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 BFSP2Q13515 415 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 ELF2Q15723 593 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 BRDTQ58F21 947 aaPredicted RBP3.15□□□□□ -1.91
CCDC93-209ENST00000488908 DNTTIP2Q5QJE6 756 aaKnown RBP3.15□□□□□ -1.91
CCDC93-209ENST00000488908 CEP85LQ5SZL2 805 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 H1FNTQ75WM6 255 aaPredicted RBP3.15□□□□□ -1.91
CCDC93-209ENST00000488908 CYB5R4Q7L1T6 521 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 CADM3Q8N126 398 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 MUC20Q8N307 709 aaPredicted RBP3.15□□□□□ -1.91
CCDC93-209ENST00000488908 RTP4Q96DX8 246 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 LRGUKQ96M69 825 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 SPRY4Q9C004 299 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 TCF7L2Q9NQB0 619 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 HOMER2Q9NSB8 354 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 RXFP3Q9NSD7 469 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 COL20A1Q9P218 1284 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 DTX4Q9Y2E6 619 aa3.15□□□□□ -1.91
CCDC93-209ENST00000488908 LOC102724159A0A0B4J2E5 919 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 FOXO6A8MYZ6 492 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 LCATP04180 440 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 SP1P08047 785 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 PWP2Q15269 919 aaKnown RBP3.14□□□□□ -1.91
CCDC93-209ENST00000488908 ZRSR1Q15695 479 aaKnown RBP3.14□□□□□ -1.91
CCDC93-209ENST00000488908 FNBP1LQ5T0N5 605 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 FAM90A2PQ658T7 463 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 APOA5Q6Q788 366 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 SLC16A12Q6ZSM3 486 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 UNC13DQ70J99 1090 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 OVCH2Q7RTZ1 564 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 GPSM1Q86YR5 675 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 LAS2Q8IYD9 372 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 GABPB2Q8TAK5 448 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-209ENST00000488908 ABHD5Q8WTS1 349 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 DUX5Q96PT3 197 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 WDR24Q96S15 920 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 TMEM60Q9H2L4 133 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 ZNF212Q9UDV6 495 aa3.14□□□□□ -1.91
CCDC93-209ENST00000488908 PRR23AA6NEV1 266 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 ERI2A8K979 691 aaKnown RBP3.13□□□□□ -1.91
CCDC93-209ENST00000488908 PRPF3O43395 683 aaKnown RBP3.13□□□□□ -1.91
CCDC93-209ENST00000488908 CBFA2T3O75081 653 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 NFATC1O95644 943 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 IGLV2-11P01706 119 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 MYBP10242 640 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 SEMA3BQ13214 749 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 CNN3Q15417 329 aaKnown RBP3.13□□□□□ -1.91
CCDC93-209ENST00000488908 ACSM6Q6P461 480 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 SDR16C5Q8N3Y7 309 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 OR52N4Q8NGI2 321 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 GLMPQ8WWB7 406 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 ADAMTS14Q8WXS8 1223 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 NODALQ96S42 347 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 DDX31Q9H8H2 851 aaKnown RBP3.13□□□□□ -1.91
CCDC93-209ENST00000488908 OGDHLQ9ULD0 1010 aa3.13□□□□□ -1.91
CCDC93-209ENST00000488908 SBNO2Q9Y2G9 1366 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 BUB3O43684 328 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 IL18RAPO95256 599 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 RFPL3SP0C7P2 107 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 TAF6P49848 677 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 TRAF1Q13077 416 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 RBM39Q14498 530 aaKnown RBP3.12□□□□□ -1.91
CCDC93-209ENST00000488908 TMEM196Q5HYL7 178 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 DCAF12L2Q5VW00 463 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 C8orf82Q6P1X6 216 aaPredicted RBP3.12□□□□□ -1.91
CCDC93-209ENST00000488908 DSTYKQ6XUX3 929 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 KDELC2Q7Z4H8 507 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 CLASRPQ8N2M8 674 aaKnown RBP3.12□□□□□ -1.91
CCDC93-209ENST00000488908 RFLNBQ8N5W9 214 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 OVCA2Q8WZ82 227 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 GPR78Q96P69 363 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 ABHD14AQ9BUJ0 271 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 RHOBTB2Q9BYZ6 727 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 CATSPERBQ9H7T0 1116 aa3.12□□□□□ -1.91
CCDC93-209ENST00000488908 CCNT2O60583 730 aaKnown RBP3.11□□□□□ -1.91
CCDC93-209ENST00000488908 CTNND1O60716 968 aaKnown RBP3.11□□□□□ -1.91
CCDC93-209ENST00000488908 SNRNP70P08621 437 aaKnown RBP3.11□□□□□ -1.91
CCDC93-209ENST00000488908 RFX5P48382 616 aaPredicted RBP3.11□□□□□ -1.91
CCDC93-209ENST00000488908 ZP1P60852 638 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 253.9 ms