RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 AMPD2Q01433 879 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 RUNX3Q13761 415 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 BOLA3Q53S33 107 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 EFHC2Q5JST6 749 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 OTUD1Q5VV17 481 aaPredicted RBP10.66□□□□□ -0.7
SKA1-204ENST00000488454 LRRC31Q6UY01 552 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 Q6ZNB5 142 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 BNIPLQ7Z465 357 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 ADGRG2Q8IZP9 1017 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 CPA6Q8N4T0 437 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 RNF10Q8N5U6 811 aaKnown RBP10.66□□□□□ -0.7
SKA1-204ENST00000488454 RIN3Q8TB24 985 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 WBP2Q969T9 261 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 ZFYVE19Q96K21 471 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 UHRF1Q96T88 793 aaPredicted RBP10.66□□□□□ -0.7
SKA1-204ENST00000488454 FAM83CQ9BQN1 747 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 KCNF1Q9H3M0 494 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 EBF3Q9H4W6 596 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 ARHGEF38Q9NXL2 777 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 CALCOCO1Q9P1Z2 691 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 PCSK1NQ9UHG2 260 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 USP18Q9UMW8 372 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 GUCA1BQ9UMX6 200 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 PPP2R2CQ9Y2T4 447 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 DUSP10Q9Y6W6 482 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 ZNF638Q14966 1978 aaKnown RBP10.66□□□□□ -0.7
SKA1-204ENST00000488454 COL6A3P12111 3177 aa10.66□□□□□ -0.7
SKA1-204ENST00000488454 GOLGA6L7A0A1B0GV03 622 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 F5H5T6 163 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 SPOPO43791 374 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 GREM1O60565 184 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 TSPAN3O60637 253 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 LRCH4O75427 683 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 PAGE1O75459 146 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ARSAP15289 507 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 MAN1A1P33908 653 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 MLLT6P55198 1093 aaPredicted RBP10.65□□□□□ -0.7
SKA1-204ENST00000488454 GAD2Q05329 585 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ZNF252P-AS1Q0IIN9 211 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 DHCR24Q15392 516 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ANO4Q32M45 955 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 EML3Q32P44 896 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ITPRIPL2Q3MIP1 535 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 MPPE1Q53F39 396 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ODF2Q5BJF6 829 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 RABGAP1LQ5R372 815 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ERMARDQ5T6L9 678 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 TRIM68Q6AZZ1 485 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 LYPD8Q6UX82 237 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ZNF662Q6ZS27 426 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 TPGS1Q6ZTW0 290 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 DAAM2Q86T65 1068 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 CHSY1Q86X52 802 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 CCDC117Q8IWD4 279 aaPredicted RBP10.65□□□□□ -0.7
SKA1-204ENST00000488454 UBALD2Q8IYN6 164 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 SYCE1Q8N0S2 351 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 CPXM2Q8N436 756 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 TPCN2Q8NHX9 752 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 KIAA1524Q8TCG1 905 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 DDI1Q8WTU0 396 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 EXOC4Q96A65 974 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 NTAN1Q96AB6 310 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 TMA16Q96EY4 203 aaKnown RBP10.65□□□□□ -0.7
SKA1-204ENST00000488454 C1orf74Q96LT6 269 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 OSBPL2Q9H1P3 480 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ECT2Q9H8V3 914 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 ZWILCHQ9H900 591 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 LZTFL1Q9NQ48 299 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 TRPV5Q9NQA5 729 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 SPHK2Q9NRA0 654 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 EVA1BQ9NVM1 165 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 STOML2Q9UJZ1 356 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 MYO16Q9Y6X6 1858 aa10.65□□□□□ -0.7
SKA1-204ENST00000488454 SPTBN5Q9NRC6 3674 aaKnown RBP10.65□□□□□ -0.7
SKA1-204ENST00000488454 TNFRSF10AO00220 468 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 BUB1BO60566 1050 aaPredicted RBP10.64□□□□□ -0.71
SKA1-204ENST00000488454 SRGAP2O75044 1071 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 KRT7P08729 469 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 ADH5P11766 374 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 TACR2P21452 398 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 COMTP21964 271 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 TNK2Q07912 1038 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 FOXC1Q12948 553 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 AUHQ13825 339 aaKnown RBP10.64□□□□□ -0.71
SKA1-204ENST00000488454 PREPLQ4J6C6 727 aaPredicted RBP10.64□□□□□ -0.71
SKA1-204ENST00000488454 RAB6CQ53S08 254 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 MS4A13Q5J8X5 152 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 LY6G5CQ5SRR4 150 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 RAP1GAP2Q684P5 730 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 RHBDF2Q6PJF5 856 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 TMEM25Q86YD3 366 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 PSTKQ8IV42 348 aaKnown RBP10.64□□□□□ -0.71
SKA1-204ENST00000488454 LGI2Q8N0V4 545 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 ARFGAP1Q8N6T3 406 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 CCDC185Q8N715 623 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 TTC8Q8TAM2 541 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 DNASE1L2Q92874 299 aa10.64□□□□□ -0.71
SKA1-204ENST00000488454 NECAB3Q96P71 396 aaPredicted RBP10.64□□□□□ -0.71
SKA1-204ENST00000488454 XPO6Q96QU8 1125 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms