RNA–Protein interactions for RNA: ENST00000488253.5

PLSCR1-215, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-215ENST00000488253 APBA1Q02410 837 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 GFPT1Q06210 699 aaPredicted RBP13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 ENPP2Q13822 863 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 KCNJ12Q14500 433 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 DCAF6Q58WW2 860 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 FAM133BQ5BKY9 247 aaKnown RBP13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 OR6B2Q6IFH4 312 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 SLC23A3Q6PIS1 610 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 CHSY1Q86X52 802 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 CACUL1Q86Y37 369 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 OR2T3Q8NH03 318 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 CYB5D2Q8WUJ1 264 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 GTPBP2Q9BX10 602 aaKnown RBP13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 LSM14BQ9BX40 385 aaKnown RBP13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 FBRSQ9HAH7 460 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 CD248Q9HCU0 757 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 ITM2CQ9NQX7 267 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 TMEM74BQ9NUR3 256 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 SLC6A14Q9UN76 642 aa13.79□□□□□ -0.2
PLSCR1-215ENST00000488253 SYNJ2BP-COX16A0A087WUM0 186 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 F5H5T6 163 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 HSF2BPO75031 334 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 FYNP06241 537 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 GLI1P08151 1106 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 SYPP08247 313 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 DLDP09622 509 aaKnown RBP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 HLA-EP13747 358 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 ENGP17813 658 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 NOVA1P51513 510 aaKnown RBP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 MS4A13Q5J8X5 152 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 SYPL2Q5VXT5 272 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 RAP1GAP2Q684P5 730 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 TMEM215Q68D42 235 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 PSAPL1Q6NUJ1 521 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 C11orf57Q6ZUT1 292 aaPredicted RBP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 LGI2Q8N0V4 545 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 HDDC3Q8N4P3 179 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 TOE1Q96GM8 510 aaKnown RBP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 BTN2A3PQ96KV6 586 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 NUP58Q9BVL2 599 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 MKRN2Q9H000 416 aaKnown RBP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 LHX5Q9H2C1 402 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 COX16Q9P0S2 106 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 SUN2Q9UH99 717 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 TNRC6BQ9UPQ9 1833 aaKnown RBP13.78□□□□□ -0.2
PLSCR1-215ENST00000488253 FOXN3O00409 490 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 LUC7L3O95232 432 aaKnown RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 KCNK5O95279 499 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 DNTTP04053 509 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 ASLP04424 464 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 SERPINF2P08697 491 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 EEF1GP26641 437 aaKnown RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 CCR1P32246 355 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 CD70P32970 193 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 TPMTP51580 245 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 RPS24P62847 133 aaKnown RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 MTA1Q13330 715 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 PLEKHG6Q3KR16 790 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 TTC31Q49AM3 519 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 ZC3H12AQ5D1E8 599 aaKnown RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 RABGAP1LQ5R372 815 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 RNF219Q5W0B1 726 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 NADSYN1Q6IA69 706 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 ADIPOR2Q86V24 386 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 FAM124AQ86V42 546 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 DEFB106AQ8N104 65 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 CFAP52Q8N1V2 620 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 TMEM35BQ8NCS4 154 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 MSANTD4Q8NCY6 345 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 C1orf131Q8NDD1 294 aaKnown RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 FIBINQ8TAL6 211 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 SLC39A13Q96H72 371 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 PRICKLE1Q96MT3 831 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 CPXM1Q96SM3 734 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 GPR174Q9BXC1 333 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 NUCKS1Q9H1E3 243 aaKnown RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 MIR1-1HGQ9H1L0 117 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 SLC32A1Q9H598 525 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 ASNSD1Q9NWL6 643 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 WSB2Q9NYS7 404 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 KIAA1522Q9P206 1035 aaPredicted RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 USP36Q9P275 1121 aaKnown RBP13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 NFE2L3Q9Y4A8 694 aa13.77□□□□□ -0.21
PLSCR1-215ENST00000488253 KCNU1A8MYU2 1149 aa13.76□□□□□ -0.21
PLSCR1-215ENST00000488253 TM4SF5O14894 197 aa13.76□□□□□ -0.21
PLSCR1-215ENST00000488253 OPHN1O60890 802 aa13.76□□□□□ -0.21
PLSCR1-215ENST00000488253 RNASEH1O60930 286 aaKnown RBP13.76□□□□□ -0.21
PLSCR1-215ENST00000488253 GRAP2O75791 330 aa13.76□□□□□ -0.21
PLSCR1-215ENST00000488253 TACR2P21452 398 aa13.76□□□□□ -0.21
PLSCR1-215ENST00000488253 NNMTP40261 264 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms