RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TRMT61AQ96FX7 289 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 GPR78Q96P69 363 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 DDX23Q9BUQ8 820 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 WDR26Q9H7D7 661 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 SEMA5BQ9P283 1151 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 KCND3Q9UK17 655 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 AGAP5A6NIR3 686 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 E7EVH7 732 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 RBMXL2O75526 392 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 CERS1P27544 350 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 PCP4P48539 62 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 AARSP49588 968 aaKnown RBP eCLIP4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 PDCLQ13371 301 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM110CQ1W6H9 321 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 CEP78Q5JTW2 689 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 DHRS13Q6UX07 377 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 SLC39A5Q6ZMH5 540 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 SYNE3Q6ZMZ3 975 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 ZNF66Q6ZN08 573 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 SYT13Q7L8C5 426 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 CNGA4Q8IV77 575 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 UEVLDQ8IX04 471 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 LAS2Q8IYD9 372 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 ADPRHL1Q8NDY3 354 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 AFG1LQ8WV93 481 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 DDB2Q92466 427 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 PIGKQ92643 395 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 DPF1Q92782 380 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 CELF1Q92879 486 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 ZNF845Q96IR2 970 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 SH2D3AQ9BRG2 576 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 ABHD14AQ9BUJ0 271 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 ITM2CQ9NQX7 267 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 PDGFCQ9NRA1 345 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 ADARB2Q9NS39 739 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 LUZP4Q9P127 313 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 B3GNT3Q9Y2A9 372 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 PCDHA10Q9Y5I2 948 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 DGKBQ9Y6T7 804 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 WDR17Q8IZU2 1322 aa4.34□□□□□ -1.71
ECHDC1-217ENST00000488087 MBD3L5A6NJ08 208 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 C16orf96A6NNT2 1141 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 DSCR3O14972 297 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 INPPL1O15357 1258 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 KAT7O95251 611 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 TUBB4AP04350 444 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 ENO1P06733 434 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 CYP3A4P08684 503 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 ADD2P35612 726 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 CDK7P50613 346 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 RBM5P52756 815 aaKnown RBP eCLIP4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 RCAN1P53805 252 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 ARL4CP56559 192 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC37A1P57057 533 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 YPEL5P62699 121 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 FOXF2Q12947 444 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 PPFIA1Q13136 1202 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 MTA1Q13330 715 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 SEC23BQ15437 767 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 ANXA2RQ3ZCQ2 193 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 TMEM88Q6PEY1 159 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 SYCE2Q6PIF2 218 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 ZNF813Q6ZN06 617 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 TFAP2DQ7Z6R9 452 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 MOGAT3Q86VF5 341 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 ANKRD18AQ8IVF6 992 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 FTSJ3Q8IY81 847 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 CLEC4CQ8WTT0 213 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 THAP4Q8WY91 577 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 FCRL5Q96RD9 977 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 PIGSQ96S52 555 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 HTATIP2Q9BUP3 242 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 KLHL13Q9P2N7 655 aa4.33□□□□□ -1.72
ECHDC1-217ENST00000488087 EMSYQ7Z589 1322 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 WIPF3A6NGB9 483 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 MASP2O00187 686 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 PPP6CO00743 305 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 RRHO14718 337 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 HEXIM1O94992 359 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 ST6GAL1P15907 406 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 RXRAP19793 462 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 SFPQP23246 707 aaKnown RBP eCLIP4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 EPHB2P29323 1055 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 ARHGAP25P42331 645 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 ZNF84P51523 738 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 FOXL2P58012 376 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 SRSF4Q08170 494 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 DMWDQ09019 674 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 ANO7Q6IWH7 933 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 DPY19L2P1Q6NXN4 242 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 C2CD5Q86YS7 1000 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 SUGP1Q8IWZ8 645 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 KAT2BQ92831 832 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 MAP4K1Q92918 833 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 RILPL2Q969X0 211 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 GCC1Q96CN9 775 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 ZSCAN31Q96LW9 406 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms