RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 C3orf70A6NLC5 250 aaPredicted RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 C2CD4BA6NLJ0 364 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 FAM90A9PA6NNJ1 464 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 SLC38A8A6NNN8 435 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 EFCAB8A8MWE9 144 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 FAM90A5PA8MXJ8 464 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 KAT7O95251 611 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 FAM90A15PP0C7V4 464 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 FAM90A14PP0C7W9 464 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 HOXD9P28356 352 aaPredicted RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 TRAPPC10P48553 1259 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 SLC12A2P55011 1212 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 RBM6P78332 1123 aaKnown RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 PDCD2Q16342 344 aaPredicted RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 TRIM60Q495X7 471 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 PXDC1Q5TGL8 231 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 RHPN2Q8IUC4 686 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 SLC44A2Q8IWA5 706 aaPredicted RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 SMG7Q92540 1137 aaKnown RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 ZNF778Q96MU6 729 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 ARPC5LQ9BPX5 153 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 GATA5Q9BWX5 397 aaPredicted RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 MAGEH1Q9H213 219 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 VPS16Q9H269 839 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 PABPC3Q9H361 631 aaKnown RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 MLXIPLQ9NP71 852 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 PRDM8Q9NQV8 689 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 TMEM184CQ9NVA4 438 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 IPO11Q9UI26 975 aaKnown RBP4.58□□□□□ -1.68
TTC3-220ENST00000487711 COL3A1P02461 1466 aaPredicted RBP4.57□□□□□ -1.68
TTC3-220ENST00000487711 hCG_1642624A0A1W2PR95 340 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 HMX3A6NHT5 357 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 CNTN5O94779 1100 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 TOP3BO95985 862 aaKnown RBP4.57□□□□□ -1.68
TTC3-220ENST00000487711 CYP3A4P08684 503 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 RFPL3SP0C7P2 107 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 CTSAP10619 480 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 CYP19A1P11511 503 aaPredicted RBP4.57□□□□□ -1.68
TTC3-220ENST00000487711 TFEBP19484 476 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 SOX2P48431 317 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 PLCD1P51178 756 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 FOXL2P58012 376 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 FAM3BP58499 235 aaPredicted RBP4.57□□□□□ -1.68
TTC3-220ENST00000487711 KRT72Q14CN4 511 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 RABEP1Q15276 862 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 EARS2Q5JPH6 523 aaKnown RBP4.57□□□□□ -1.68
TTC3-220ENST00000487711 LIPMQ5VYY2 423 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 SHC4Q6S5L8 630 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 ZNF793Q6ZN11 406 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 ANKRD13BQ86YJ7 626 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 NANOGP1Q8N7R0 232 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 SCAMP5Q8TAC9 235 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 C3orf49Q96BT1 292 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 TMEM120AQ9BXJ8 343 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 SFXN1Q9H9B4 322 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 MLXIPQ9HAP2 919 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 ERVK-5Q9HDB9 667 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 MTMR4Q9NYA4 1195 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 GRHPRQ9UBQ7 328 aa4.57□□□□□ -1.68
TTC3-220ENST00000487711 C19orf53Q9UNZ5 99 aaPredicted RBP4.57□□□□□ -1.68
TTC3-220ENST00000487711 AGAP5A6NIR3 686 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 TGM2P21980 687 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 PNLIPRP1P54315 467 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 SHC2P98077 582 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 FOXO1Q12778 655 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 TIGD6Q17RP2 521 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 TBRG1Q3YBR2 411 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 TUBB8Q3ZCM7 444 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 FAM83BQ5T0W9 1011 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 PAPD7Q5XG87 772 aaKnown RBP4.56□□□□□ -1.68
TTC3-220ENST00000487711 TMEM88Q6PEY1 159 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 FAM57BQ71RH2 274 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 UBE2Q1Q7Z7E8 422 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 ADGRF4Q8IZF3 695 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 MYCT1Q8N699 235 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 STT3BQ8TCJ2 826 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 BCAS4Q8TDM0 211 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 PIGOQ8TEQ8 1089 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 ZFPM2Q8WW38 1151 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 CPT1BQ92523 772 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 RUBCNQ92622 972 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 TRAPPC9Q96Q05 1148 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 PAGR1Q9BTK6 254 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 HTATIP2Q9BUP3 242 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 SORBS1Q9BX66 1292 aaKnown RBP4.56□□□□□ -1.68
TTC3-220ENST00000487711 C1QTNF7Q9BXJ2 289 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 SPRTNQ9H040 489 aaPredicted RBP4.56□□□□□ -1.68
TTC3-220ENST00000487711 OSBPL5Q9H0X9 879 aaPredicted RBP4.56□□□□□ -1.68
TTC3-220ENST00000487711 MOV10Q9HCE1 1003 aaKnown RBP4.56□□□□□ -1.68
TTC3-220ENST00000487711 SEPSECSQ9HD40 501 aaKnown RBP4.56□□□□□ -1.68
TTC3-220ENST00000487711 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.56□□□□□ -1.68
TTC3-220ENST00000487711 TMEM45AQ9NWC5 275 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 SLC8A2Q9UPR5 921 aa4.56□□□□□ -1.68
TTC3-220ENST00000487711 MBD3L5A6NJ08 208 aaPredicted RBP4.55□□□□□ -1.68
TTC3-220ENST00000487711 UGDHO60701 494 aa4.55□□□□□ -1.68
TTC3-220ENST00000487711 SGPL1O95470 568 aa4.55□□□□□ -1.68
TTC3-220ENST00000487711 FGBP02675 491 aa4.55□□□□□ -1.68
TTC3-220ENST00000487711 ALDOCP09972 364 aaKnown RBP4.55□□□□□ -1.68
TTC3-220ENST00000487711 LMO1P25800 156 aa4.55□□□□□ -1.68
TTC3-220ENST00000487711 SERPINA4P29622 427 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms