RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 C18orf8Q96DM3 657 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 MRGPRX1Q96LB2 322 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 SPAG5Q96R06 1193 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 SLC6A17Q9H1V8 727 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 HSD3B7Q9H2F3 369 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 SMOC1Q9H4F8 434 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 DLL3Q9NYJ7 618 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 PLA2G4CQ9UP65 541 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 WDR87Q6ZQQ6 2873 aa21.18■□□□□ 0.98
HDAC4-209ENST00000487617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.17■□□□□ 0.98
HDAC4-209ENST00000487617 BCLAF3A2AJT9 711 aaKnown RBP21.17■□□□□ 0.98
HDAC4-209ENST00000487617 LRRC10BA6NIK2 292 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 ZNF217O75362 1048 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 CAVIN2O95810 425 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 ABCB4P21439 1286 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 TACR2P21452 398 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 PRKCHP24723 683 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 CCR1P32246 355 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 CD70P32970 193 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 NOS2P35228 1153 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 GABRB2P47870 512 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 JAM2P57087 298 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 RNASE9P60153 205 aaKnown RBP21.17■□□□□ 0.98
HDAC4-209ENST00000487617 NME3Q13232 169 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 AASDHQ4L235 1098 aaPredicted RBP21.17■□□□□ 0.98
HDAC4-209ENST00000487617 FNDC3BQ53EP0 1204 aaKnown RBP21.17■□□□□ 0.98
HDAC4-209ENST00000487617 PLA2G2CQ5R387 149 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 MBLAC2Q68D91 279 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 KIAA1324Q6UXG2 1013 aaKnown RBP21.17■□□□□ 0.98
HDAC4-209ENST00000487617 CYP2U1Q7Z449 544 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 KIAA0907Q7Z7F0 614 aaPredicted RBP21.17■□□□□ 0.98
HDAC4-209ENST00000487617 ADIPOR2Q86V24 386 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 TMEFF1Q8IYR6 380 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 CARNMT1Q8N4J0 409 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 MSANTD4Q8NCY6 345 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 FIBINQ8TAL6 211 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 CYB5D2Q8WUJ1 264 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 VPS45Q9NRW7 570 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 FRYLO94915 3013 aa21.17■□□□□ 0.98
HDAC4-209ENST00000487617 SPAG17Q6Q759 2223 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 KCNU1A8MYU2 1149 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 POLR2EP19388 210 aaKnown RBP21.16■□□□□ 0.98
HDAC4-209ENST00000487617 STAT1P42224 750 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 CDH18Q13634 790 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 NAA35Q5VZE5 725 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 SLC36A4Q6YBV0 504 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 ZNF677Q86XU0 584 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 NETO1Q8TDF5 533 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 SLC20A1Q8WUM9 679 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 CPA5Q8WXQ8 436 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDAC4-209ENST00000487617 NOCTQ9UK39 431 aaKnown RBP21.16■□□□□ 0.98
HDAC4-209ENST00000487617 CYP8B1Q9UNU6 501 aa21.16■□□□□ 0.98
HDAC4-209ENST00000487617 SPTBN4Q9H254 2564 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 F5H5T6 163 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 M0QYT0 321 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 GDF9O60383 454 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 ATP5BP06576 529 aaKnown RBP21.15■□□□□ 0.98
HDAC4-209ENST00000487617 EPHX1P07099 455 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 ATP1A3P13637 1013 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 HLA-EP13747 358 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 MATKP42679 507 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 NOMO3P69849 1222 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 CDR2Q01850 454 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 LMAN2Q12907 356 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 C2CD6Q53TS8 623 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 FAM102AQ5T9C2 384 aaPredicted RBP21.15■□□□□ 0.98
HDAC4-209ENST00000487617 ARMCX6Q7L4S7 300 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 APTXQ7Z2E3 356 aaKnown RBP21.15■□□□□ 0.98
HDAC4-209ENST00000487617 DGLUCYQ7Z3D6 616 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 XYLT1Q86Y38 959 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 ERGIC2Q96RQ1 377 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 BPIFA3Q9BQP9 254 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 PRDM16Q9HAZ2 1276 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 RRN3Q9NYV6 651 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 STAP1Q9ULZ2 295 aa21.15■□□□□ 0.98
HDAC4-209ENST00000487617 IGHV1OR15-9A0A0B4J2B8 117 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 SMTNL1A8MU46 457 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 H0Y626 953 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 LUC7L3O95232 432 aaKnown RBP21.14■□□□□ 0.97
HDAC4-209ENST00000487617 DLDP09622 509 aaKnown RBP21.14■□□□□ 0.97
HDAC4-209ENST00000487617 SCNN1AP37088 669 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 RPL6Q02878 288 aaKnown RBP21.14■□□□□ 0.97
HDAC4-209ENST00000487617 TCEAL6Q6IPX3 200 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 TMPRSS6Q8IU80 811 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 PIGKQ92643 395 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 TCEAL3Q969E4 200 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 LMLNQ96KR4 655 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 PRMT1Q99873 361 aaKnown RBP21.14■□□□□ 0.97
HDAC4-209ENST00000487617 MKRN2Q9H000 416 aaKnown RBP21.14■□□□□ 0.97
HDAC4-209ENST00000487617 ABCA7Q8IZY2 2146 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 CEP250Q9BV73 2442 aa21.14■□□□□ 0.97
HDAC4-209ENST00000487617 GOLGA8SH3BPF8 625 aa21.13■□□□□ 0.97
HDAC4-209ENST00000487617 AP5Z1O43299 807 aa21.13■□□□□ 0.97
HDAC4-209ENST00000487617 CHRNB2P17787 502 aa21.13■□□□□ 0.97
HDAC4-209ENST00000487617 PTGER3P43115 390 aa21.13■□□□□ 0.97
HDAC4-209ENST00000487617 SULT1E1P49888 294 aa21.13■□□□□ 0.97
HDAC4-209ENST00000487617 ATXN1P54253 815 aaKnown RBP21.13■□□□□ 0.97
HDAC4-209ENST00000487617 FMO1Q01740 532 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms