RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ST13P4Q8IZP2 240 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ZNF398Q8TD17 642 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 DNAJC9Q8WXX5 260 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 OXNAD1Q96HP4 312 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 TWNKQ96RR1 684 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SHCBP1LQ9BZQ2 653 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 MORF4L1Q9UBU8 362 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 NFS1Q9Y697 457 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 EDF1O60869 148 aaKnown RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 UPP2O95045 317 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 KCNA4P22459 653 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 CCDC153Q494R4 210 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 AGAP9Q5VTM2 703 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 NFKBIZQ9BYH8 718 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 VCX3AQ9NNX9 186 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 BATF3Q9NR55 127 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 CHST12Q9NRB3 414 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 PCDHA11Q9Y5I1 949 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 CLUHO75153 1309 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 A0A096LPK6 155 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 FOXO6A8MYZ6 492 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 EDNRBP24530 442 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 CYP2C18P33260 490 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 TUBP50607 506 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 ANKS1BQ7Z6G8 1248 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 FAM35AQ86V20 835 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 TDRPQ86YL5 185 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 OR52K1Q8NGK4 314 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 LPPQ93052 612 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 TAGLN3Q9UI15 199 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 BCLAF3A2AJT9 711 aaKnown RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 MPOP05164 745 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 CREB1P16220 341 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 RPL9P32969 192 aaKnown RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 RCN1Q15293 331 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 FNBP1LQ5T0N5 605 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 C16orf89Q6UX73 402 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 BCO2Q9BYV7 579 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 TRIM15Q9C019 465 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 NT5MQ9NPB1 228 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 RCOR3Q9P2K3 495 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 ARHGAP26Q9UNA1 814 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 SLC12A8A0AV02 714 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 PAPSS1O43252 624 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 ZBTB48P10074 688 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 ERVK-10P10266 1014 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 SLC1A6P48664 564 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 PPM1FP49593 454 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 MARC1Q5VT66 337 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 EFHBQ8N7U6 833 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 CMASQ8NFW8 434 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-214ENST00000487615 BLOC1S5Q8TDH9 187 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 SLC44A1Q8WWI5 657 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 INPP5DQ92835 1189 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 CERS2Q96G23 380 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 SYT11Q9BT88 431 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 ABCC13Q9NSE7 274 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 PCDHB5Q9Y5E4 795 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 RREB1Q92766 1687 aa12.1□□□□□ -0.47
TRA2B-214ENST00000487615 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-214ENST00000487615 F5H5T6 163 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 IL1R2P27930 398 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SLC11A2P49281 568 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 RENBPP51606 427 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 GDF10P55107 478 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 OGDHQ02218 1023 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 PDPK2PQ6A1A2 396 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 MRNIPQ6NTE8 343 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 P2RY11Q96G91 374 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 MRPL1Q9BYD6 325 aaKnown RBP12.09□□□□□ -0.47
TRA2B-214ENST00000487615 MUC3BQ9H195 1237 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SUDS3Q9H7L9 328 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-214ENST00000487615 GIT1Q9Y2X7 761 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 L3MBTL1Q9Y468 752 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TULP2O00295 520 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 KIF3CO14782 793 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TCEA3O75764 348 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ALDH1A1P00352 501 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TBX4P57082 545 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 HABP4Q5JVS0 413 aaKnown RBP12.09□□□□□ -0.47
TRA2B-214ENST00000487615 RARS2Q5T160 578 aaKnown RBP12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SCUBE1Q8IWY4 988 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ZFP42Q96MM3 310 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 IL22Q9GZX6 179 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 CYLDQ9NQC7 956 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SLC8A2Q9UPR5 921 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TRPC5OSA6NMA1 111 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TRIM13O60858 407 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms