RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 METTL3Q86U44 580 aaKnown RBP11.87□□□□□ -0.51
SPEN-205ENST00000487496 ZDHHC17Q8IUH5 632 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 MFN1Q8IWA4 741 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 AHI1Q8N157 1196 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 CFAP52Q8N1V2 620 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 ZNF557Q8N988 423 aaPredicted RBP11.87□□□□□ -0.51
SPEN-205ENST00000487496 FIBINQ8TAL6 211 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 CYB5D2Q8WUJ1 264 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 LMLNQ96KR4 655 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 BTN2A3PQ96KV6 586 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 MKRN2Q9H000 416 aaKnown RBP11.87□□□□□ -0.51
SPEN-205ENST00000487496 FAM204AQ9H8W3 233 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPEN-205ENST00000487496 CYP8B1Q9UNU6 501 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 PLA2G4CQ9UP65 541 aa11.87□□□□□ -0.51
SPEN-205ENST00000487496 DNAH14Q0VDD8 3507 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 AP5Z1O43299 807 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 DAB1O75553 588 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 ATP5BP06576 529 aaKnown RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 EPHX1P07099 455 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 DLDP09622 509 aaKnown RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 SLC2A3P11169 496 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 HLA-EP13747 358 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 ZNF18P17022 549 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 TACR2P21452 398 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 NOS2P35228 1153 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 LIMK1P53667 647 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 POLR2FP61218 127 aaKnown RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 RPL6Q02878 288 aaKnown RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 LMAN2Q12907 356 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 NCAPHQ15003 741 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 PTPRNQ16849 979 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 LYSMD4Q5XG99 296 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 KIAA1324Q6UXG2 1013 aaKnown RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 SLC36A4Q6YBV0 504 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 NOP9Q86U38 636 aaKnown RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 CHSY1Q86X52 802 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 TMPRSS6Q8IU80 811 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 LGI2Q8N0V4 545 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 CARNMT1Q8N4J0 409 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 DEFB119Q8N690 84 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 ATP6V0D2Q8N8Y2 350 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 ANKRD20A12PQ8NF67 263 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 EPS8L1Q8TE68 723 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 PIGKQ92643 395 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 HSD3B7Q9H2F3 369 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 TMEM245Q9H330 911 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 PRDM16Q9HAZ2 1276 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 CD93Q9NPY3 652 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 ITM2CQ9NQX7 267 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 FAM207AQ9NSI2 230 aaPredicted RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 TMEM74BQ9NUR3 256 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 DDIT4Q9NX09 232 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 TMEM63CQ9P1W3 806 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 LIMA1Q9UHB6 759 aaKnown RBP11.86□□□□□ -0.51
SPEN-205ENST00000487496 SLC12A6Q9UHW9 1150 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 SIK3Q9Y2K2 1263 aa11.86□□□□□ -0.51
SPEN-205ENST00000487496 THADAQ6YHU6 1953 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 DMXL1Q9Y485 3027 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 CACNA1AO00555 2505 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 SYNJ2BP-COX16A0A087WUM0 186 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 LNP1A1A4G5 178 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 LRRC10BA6NIK2 292 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 PATE3B3GLJ2 98 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 KHNYNO15037 678 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 EPHB6O15197 1021 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 GFPT2O94808 682 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 LUC7L3O95232 432 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 LSM8O95777 96 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 MMEP08473 750 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 POLR2EP19388 210 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 CDK11BP21127 795 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 ABCB4P21439 1286 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 ITPKAP23677 461 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 CCR1P32246 355 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 MATKP42679 507 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 GABRB2P47870 512 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 COPAP53621 1224 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 TYRO3Q06418 890 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 NME3Q13232 169 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 CAMK2GQ13555 558 aaPredicted RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 CDH18Q13634 790 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 SYCP1Q15431 976 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 FNDC3BQ53EP0 1204 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 FSCBQ5H9T9 825 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 STPG1Q5TH74 334 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 MMS22LQ6ZRQ5 1243 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 ERICH1Q86X53 443 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 SYT12Q8IV01 421 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 CCDC117Q8IWD4 279 aaPredicted RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 ZNF366Q8N895 744 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 RNF34Q969K3 372 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 TTC17Q96AE7 1141 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 SIPA1Q96FS4 1042 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 PRMT1Q99873 361 aaKnown RBP11.85□□□□□ -0.51
SPEN-205ENST00000487496 NLRC4Q9NPP4 1024 aa11.85□□□□□ -0.51
SPEN-205ENST00000487496 COX16Q9P0S2 106 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms