RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 DCLK1O15075 740 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 FGF10O15520 208 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 ADAM12O43184 909 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 SOAT2O75908 522 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 FGF18O76093 207 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 VNN2O95498 520 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 ZSCAN5DPP0CG00 497 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 ETS1P14921 441 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 ERCC2P18074 760 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 MX2P20592 715 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 RBL1P28749 1068 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 EPHB2P29323 1055 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 OAS2P29728 719 aaKnown RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 RPL22P35268 128 aaKnown RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 GGCXP38435 758 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 PPP3CCP48454 512 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 COG7P83436 770 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 NRG1Q02297 640 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 GBE1Q04446 702 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 IFFO1Q0D2I5 559 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 EFEMP1Q12805 493 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 PLD1Q13393 1074 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 ELOAQ14241 798 aaKnown RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 TRIP4Q15650 581 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 C10orf120Q5SQS8 335 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 TMEM240Q5SV17 173 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 DENND2CQ68D51 928 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 CENPUQ71F23 418 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 C16orf59Q7L2K0 433 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 TMCO2Q7Z6W1 182 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 C7orf61Q8IZ16 206 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 ZCCHC9Q8N567 271 aaKnown RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 LZTR1Q8N653 840 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 GLIS1Q8NBF1 620 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 STKLD1Q8NE28 680 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 PHOSPHO2Q8TCD6 241 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 GPR152Q8TDT2 470 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 HERVK_113Q902F9 699 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 TBC1D31Q96DN5 1066 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 RTP4Q96DX8 246 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 OLFM3Q96PB7 478 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 RAD9AQ99638 391 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 LBHD1Q9BQE6 289 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 FRMD8Q9BZ67 464 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 MAGEB5Q9BZ81 275 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 TXLNGYQ9BZA5 131 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 PHACTR1Q9C0D0 580 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 SIK2Q9H0K1 926 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 CRISPLD1Q9H336 500 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 CYP4F11Q9HBI6 524 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 TMPRSS4Q9NRS4 437 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 DTLQ9NZJ0 730 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 TRPM5Q9NZQ8 1165 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 MARCH2Q9P0N8 246 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 UXTQ9UBK9 157 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 SFMBT1Q9UHJ3 866 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 MAGED2Q9UNF1 606 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-206ENST00000487062 RWDD3Q9Y3V2 267 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 PLXNA4Q9HCM2 1894 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 PCNTO95613 3336 aa7.27□□□□□ -1.25
SF3A3-206ENST00000487062 SHROOM3Q8TF72 1996 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 SLC12A8A0AV02 714 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 C5orf60A6NFR6 353 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 KCNU1A8MYU2 1149 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 FAM72CH0Y354 149 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CHADO15335 359 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 EIF3HO15372 352 aaKnown RBP eCLIP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 MTSS1O43312 755 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 MSI1O43347 362 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 MFSD11O43934 449 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 LPXNO60711 386 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 PAGE1O75459 146 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 GCATO75600 419 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 LRIG2O94898 1065 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 NUDT17P0C025 328 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ZDHHC11BP0C7U3 371 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 MYZAPP0CAP1 466 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 SRGAP2BP0DMP2 458 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CTSAP10619 480 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ATF6P18850 670 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CA8P35219 290 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ATP5C1P36542 298 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 EPHB3P54753 998 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 GDF10P55107 478 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ARL4CP56559 192 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 BASP1P80723 227 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 RING1Q06587 406 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 AP1B1Q10567 949 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 SLC10A2Q12908 348 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 UAP1Q16222 522 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CEP85LQ5SZL2 805 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 RNASEH2BQ5TBB1 312 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 FAM72AQ5TYM5 149 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 RASIP1Q5U651 963 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 SNX30Q5VWJ9 437 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 NUGGCQ68CJ6 796 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 FAM72DQ6L9T8 149 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 RWDD4Q6NW29 188 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 LRRC31Q6UY01 552 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ARHGEF18Q6ZSZ5 1173 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms