RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ASIC4Q96FT7 647 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 P2RY11Q96G91 374 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 RBM41Q96IZ5 413 aaKnown RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 CSPG4P5Q96PW8 444 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 ZFP14Q9HCL3 533 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 OR12D3Q9UGF7 316 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 SLC12A6Q9UHW9 1150 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 DOCK6Q96HP0 2047 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 hCG_1818297A0A087WSY0 165 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 GOLGA6L7A0A1B0GV03 622 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 LRRD1A4D1F6 860 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 DRGXA6NNA5 263 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 PI4K2BG5E9Z4 385 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 CES2O00748 559 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 KCNK3O14649 394 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 ZRANB2O95218 330 aaKnown RBP eCLIP9.89□□□□□ -0.83
MCF2L-227ENST00000486806 PYGMP11217 842 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 IL9P15248 144 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 PRLRP16471 622 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 GOT1P17174 413 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 SP100P23497 879 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-227ENST00000486806 HCAR3P49019 387 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 SGSHP51688 502 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 COPS2P61201 443 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 ZNF211Q13398 564 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-227ENST00000486806 KRT81Q14533 505 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 PPP6R3Q5H9R7 873 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-227ENST00000486806 FBXL22Q6P050 247 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 RFX8Q6ZV50 586 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 MTSS1LQ765P7 747 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 C14orf80Q86SX3 495 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 NLRP14Q86W24 1093 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 RCOR2Q8IZ40 523 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 ZDHHC14Q8IZN3 488 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 DEPDC1BQ8WUY9 529 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 OSCP1Q8WVF1 389 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 OTUB2Q96DC9 234 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 TBC1D31Q96DN5 1066 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 OSBPL9Q96SU4 736 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 PSMB7Q99436 277 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 EPAS1Q99814 870 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 HERPUD2Q9BSE4 406 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 PLA2G2FQ9BZM2 168 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 ARHGEF4Q9NR80 690 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 CWC15Q9P013 229 aaKnown RBP9.89□□□□□ -0.83
MCF2L-227ENST00000486806 TBC1D14Q9P2M4 693 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 PPARGC1AQ9UBK2 798 aaKnown RBP9.89□□□□□ -0.83
MCF2L-227ENST00000486806 ZNF212Q9UDV6 495 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 VANGL2Q9ULK5 521 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 NR2E1Q9Y466 385 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 WNT6Q9Y6F9 365 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 NUMBLQ9Y6R0 609 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 COL4A3Q01955 1670 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 C5orf42Q9H799 3197 aa9.89□□□□□ -0.83
MCF2L-227ENST00000486806 BRWD1Q9NSI6 2320 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 WASH4PA8MWX3 477 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 F5H5T6 163 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 H3BRJ5 948 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 ARNTLO00327 626 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 EEF2KO00418 725 aaKnown RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 SLC9A3R1O14745 358 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 CREB3O43889 395 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 TCP1P17987 556 aaKnown RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 CASQ1P31415 396 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 CXCR5P32302 372 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 CHKAP35790 457 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 IRAK1P51617 712 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 VCPP55072 806 aaKnown RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 TPI1P60174 286 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 KLF1Q13351 362 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 EML3Q32P44 896 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 TFDP3Q5H9I0 405 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 TTC39BQ5VTQ0 682 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 SLC9A4Q6AI14 798 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 AADACL2Q6P093 401 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 RFWD3Q6PCD5 774 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 MAP7D3Q8IWC1 876 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 MFSD6LQ8IWD5 586 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 RASGEF1CQ8N431 466 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 PQLC3Q8N755 202 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 KCTD6Q8NC69 237 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 ST13P5Q8NFI4 369 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 PCDH19Q8TAB3 1148 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 COG1Q8WTW3 980 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 IGSF8Q969P0 613 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 RNF25Q96BH1 459 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 RPRD1AQ96P16 312 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 DDX50Q9BQ39 737 aaKnown RBP9.88□□□□□ -0.83
MCF2L-227ENST00000486806 KXD1Q9BQD3 176 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 FAM83CQ9BQN1 747 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 CALN1Q9BXU9 219 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 SIK2Q9H0K1 926 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 MARK1Q9P0L2 795 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 THEGQ9P2T0 379 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 FAM50BQ9Y247 325 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 EFR3BQ9Y2G0 817 aa9.88□□□□□ -0.83
MCF2L-227ENST00000486806 COL6A3P12111 3177 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms