RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 NADSYN1Q6IA69 706 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 DPY19L2P1Q6NXN4 242 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 SLC36A4Q6YBV0 504 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 SLC26A9Q7LBE3 791 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 DGLUCYQ7Z3D6 616 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
CHMP3-208ENST00000486404 CACUL1Q86Y37 369 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 LGI2Q8N0V4 545 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 WDTC1Q8N5D0 677 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 SORCS1Q8WY21 1168 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 SLC39A13Q96H72 371 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 NLRC4Q9NPP4 1024 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
CHMP3-208ENST00000486404 CYP8B1Q9UNU6 501 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 PLA2G4CQ9UP65 541 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 H0Y626 953 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 GOLGA8SH3BPF8 625 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 AP5Z1O43299 807 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 IGLV3-25P01717 112 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 ZNF806P0C7X5 589 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 TACR2P21452 398 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 TGM1P22735 817 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 PRKCHP24723 683 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 SOX5P35711 763 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 STAT1P42224 750 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 SULT1E1P49888 294 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 RPS24P62847 133 aaKnown RBP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 PITX1P78337 314 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 SF3A2Q15428 464 aaKnown RBP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 FUT11Q495W5 492 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 MS4A13Q5J8X5 152 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 RABGAP1LQ5R372 815 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 LYSMD4Q5XG99 296 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 MBLAC2Q68D91 279 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 SND1Q7KZF4 910 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 EPS8L1Q8TE68 723 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 CYB5D2Q8WUJ1 264 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 SMOC1Q9H4F8 434 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 PRDM16Q9HAZ2 1276 aa13.35□□□□□ -0.27
CHMP3-208ENST00000486404 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHMP3-208ENST00000486404 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 BCLAF3A2AJT9 711 aaKnown RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 KCNU1A8MYU2 1149 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 WASH3PC4AMC7 463 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 NDUFS2O75306 463 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 LUC7L3O95232 432 aaKnown RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 MOCS3O95396 460 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 CAVIN2O95810 425 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 MMEP08473 750 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 ACADMP11310 421 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 CD70P32970 193 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 NOS2P35228 1153 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 DPP6P42658 865 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 RNASE9P60153 205 aaKnown RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 CDR2Q01850 454 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 MTA1Q13330 715 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 TTC39BQ5VTQ0 682 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 RNF219Q5W0B1 726 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 ERMP1Q7Z2K6 904 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 TMEFF1Q8IYR6 380 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 CFAP52Q8N1V2 620 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 ZNF397Q8NF99 534 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 WFDC5Q8TCV5 224 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 SLC20A1Q8WUM9 679 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 PIGKQ92643 395 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 PRCCQ92733 491 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 C18orf8Q96DM3 657 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 MRGPRX1Q96LB2 322 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 SLC6A17Q9H1V8 727 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 SEPT11Q9NVA2 429 aaKnown RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 RRN3Q9NYV6 651 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 XPO7Q9UIA9 1087 aaKnown RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
CHMP3-208ENST00000486404 ATXN2Q99700 1313 aaKnown RBP13.34□□□□□ -0.27
CHMP3-208ENST00000486404 PI4KAP42356 2102 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 SMTNL1A8MU46 457 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 M0QYT0 321 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 EPHB6O15197 1021 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 DLDP09622 509 aaKnown RBP13.33□□□□□ -0.28
CHMP3-208ENST00000486404 HLA-EP13747 358 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 ZNF18P17022 549 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 SCNN1AP37088 669 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 MATKP42679 507 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 JAM2P57087 298 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 NOMO3P69849 1222 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 LMAN2Q12907 356 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 PLA2G2CQ5R387 149 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 TMEM215Q68D42 235 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms