RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 HS3ST4Q9Y661 456 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 GOLGA6L3A6NEY3 463 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 ANTXRLA6NF34 631 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 TMEM191CA6NGB0 347 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 GOLGA6L6A8MZA4 724 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 I6L893 689 aaPredicted RBP12.25□□□□□ -0.45
HPS4-214ENST00000485842 ENDOD1O94919 500 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 MAGEA9P43362 315 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 FBXO43Q4G163 708 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 PREPLQ4J6C6 727 aaPredicted RBP12.25□□□□□ -0.45
HPS4-214ENST00000485842 RABGAP1LQ5R372 815 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 FBXL22Q6P050 247 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 SCYL2Q6P3W7 929 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 PKN3Q6P5Z2 889 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 NUDT18Q6ZVK8 323 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.25□□□□□ -0.45
HPS4-214ENST00000485842 C14orf80Q86SX3 495 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 MFN1Q8IWA4 741 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 CCDC117Q8IWD4 279 aaPredicted RBP12.25□□□□□ -0.45
HPS4-214ENST00000485842 CARNMT1Q8N4J0 409 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 CCDC185Q8N715 623 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 CTNNBL1Q8WYA6 563 aaPredicted RBP12.25□□□□□ -0.45
HPS4-214ENST00000485842 RPRD1AQ96P16 312 aaPredicted RBP12.25□□□□□ -0.45
HPS4-214ENST00000485842 PANX2Q96RD6 677 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 PRMT1Q99873 361 aaKnown RBP12.25□□□□□ -0.45
HPS4-214ENST00000485842 TMEM51Q9NW97 253 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 CTTNBP2NLQ9P2B4 639 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 VANGL2Q9ULK5 521 aa12.25□□□□□ -0.45
HPS4-214ENST00000485842 K7EQS6 105 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 CYP1A2P05177 515 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 H2AFZP0C0S5 128 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 CISD3P0C7P0 127 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 TIE1P35590 1138 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 IRAK1P51617 712 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 ZNF252P-AS1Q0IIN9 211 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 MTAPQ13126 283 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 MTA1Q13330 715 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 CDH18Q13634 790 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 AUHQ13825 339 aaKnown RBP12.24□□□□□ -0.45
HPS4-214ENST00000485842 GAS6Q14393 721 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 ARL13BQ3SXY8 428 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 C2orf27AQ580R0 203 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 MPP7Q5T2T1 576 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 H2AFVQ71UI9 128 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 ANKS1BQ7Z6G8 1248 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 SYNPOQ8N3V7 929 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 RPLP0P6Q8NHW5 317 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 WFDC5Q8TCV5 224 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 CENPIQ92674 756 aaPredicted RBP12.24□□□□□ -0.45
HPS4-214ENST00000485842 IGSF8Q969P0 613 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 SLC2A11Q9BYW1 496 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 IRX2Q9BZI1 471 aaPredicted RBP12.24□□□□□ -0.45
HPS4-214ENST00000485842 GRPEL1Q9HAV7 217 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 ZDHHC4Q9NPG8 344 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 ABCB8Q9NUT2 735 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 IMPACTQ9P2X3 320 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 ANAPC7Q9UJX3 599 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 FBXO10Q9UK96 956 aa12.24□□□□□ -0.45
HPS4-214ENST00000485842 SOWAHDA6NJG2 315 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 PRRT4C9JH25 899 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 H0Y626 953 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 LAMTOR5O43504 91 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
HPS4-214ENST00000485842 SRGAP2O75044 1071 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
HPS4-214ENST00000485842 PABPC1P11940 636 aaKnown RBP12.23□□□□□ -0.45
HPS4-214ENST00000485842 ADRA1BP35368 520 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 CYLC1P35663 651 aaPredicted RBP12.23□□□□□ -0.45
HPS4-214ENST00000485842 TNFRSF4P43489 277 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 GEN1Q17RS7 908 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 EMC10Q5UCC4 262 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 TTC39BQ5VTQ0 682 aaPredicted RBP12.23□□□□□ -0.45
HPS4-214ENST00000485842 LRRC31Q6UY01 552 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 SLFN11Q7Z7L1 901 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 SPEM1Q8N4L4 309 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 CCDC33Q8N5R6 958 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 ZNF513Q8N8E2 541 aaPredicted RBP12.23□□□□□ -0.45
HPS4-214ENST00000485842 ZNF564Q8TBZ8 553 aaPredicted RBP12.23□□□□□ -0.45
HPS4-214ENST00000485842 FNIP1Q8TF40 1166 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 HAPLN3Q96S86 360 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 CIPCQ9C0C6 399 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 GGA2Q9UJY4 613 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 SLC27A6Q9Y2P4 619 aa12.23□□□□□ -0.45
HPS4-214ENST00000485842 A0A1B0GVM2 712 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 TCAF2A6NFQ2 919 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 E9PAM4 449 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 RNF8O76064 485 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 KLF8O95600 359 aaPredicted RBP12.22□□□□□ -0.45
HPS4-214ENST00000485842 TMEM253P0C7T8 217 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 HLA-FP30511 346 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 CD70P32970 193 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 NUMBP49757 651 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 SATB1Q01826 763 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 LMAN2Q12907 356 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 ANGPT1Q15389 498 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 EFHC2Q5JST6 749 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 DAB2IPQ5VWQ8 1189 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 EGFLAMQ63HQ2 1017 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 RNF43Q68DV7 783 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms