RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 PNMA6EA0A0J9YXQ4 647 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 KIR2DS3K7RE56 304 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 SMAD6O43541 496 aaKnown RBP3.7□□□□□ -1.82
VPS50-216ENST00000484954 PPP6R2O75170 966 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 CNTN5O94779 1100 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 OAZ2O95190 189 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 CHRNB1P11230 501 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 AKR1A1P14550 325 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 HOXB2P14652 356 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 CCKARP32238 428 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 IL6STP40189 918 aaPredicted RBP3.7□□□□□ -1.82
VPS50-216ENST00000484954 NEK3P51956 506 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 FAM3BP58499 235 aaPredicted RBP3.7□□□□□ -1.82
VPS50-216ENST00000484954 SHC2P98077 582 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 INPP5JQ15735 1006 aaPredicted RBP3.7□□□□□ -1.82
VPS50-216ENST00000484954 PRTGQ2VWP7 1150 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 KIAA1755Q5JYT7 1200 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 PIK3CD-AS1Q5SR53 167 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 MANEAQ5SRI9 462 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 LIPMQ5VYY2 423 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 IZUMO3Q5VZ72 239 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 MEPCEQ7L2J0 689 aaKnown RBP3.7□□□□□ -1.82
VPS50-216ENST00000484954 DPP9Q86TI2 863 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 OR4N4Q8N0Y3 316 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 TMEM199Q8N511 208 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 KAT2AQ92830 837 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 KAT2BQ92831 832 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 PAAF1Q9BRP4 392 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 TUBB6Q9BUF5 446 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 ABHD14AQ9BUJ0 271 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 TRIM2Q9C040 744 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 CERS4Q9HA82 394 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 IL21RQ9HBE5 538 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS50-216ENST00000484954 ANO9A1A5B4 782 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 PIP5K1BO14986 540 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 RPP40O75818 363 aaKnown RBP3.69□□□□□ -1.82
VPS50-216ENST00000484954 NTSR2O95665 410 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 ANXA6P08133 673 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 ABCB4P21439 1286 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 PPATQ06203 517 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 CSHL1Q14406 222 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 AAK1Q2M2I8 961 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 B4GALNT4Q76KP1 1039 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 ADGRF3Q8IZF5 1079 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 ACRBPQ8NEB7 543 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 MARK4Q96L34 752 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 CCDC138Q96M89 665 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 EIF2AQ9BY44 585 aaKnown RBP3.69□□□□□ -1.82
VPS50-216ENST00000484954 PRDM16Q9HAZ2 1276 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 NECTIN3Q9NQS3 549 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 DECR2Q9NUI1 292 aa3.69□□□□□ -1.82
VPS50-216ENST00000484954 UBE2J1Q9Y385 318 aaPredicted RBP3.69□□□□□ -1.82
VPS50-216ENST00000484954 AQP12BA6NM10 295 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 GTPBP1O00178 669 aaKnown RBP3.68□□□□□ -1.82
VPS50-216ENST00000484954 NKX2-8O15522 239 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 PLA2G6O60733 806 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 USP12O75317 370 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 FOXL2P58012 376 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 TAS2R50P59544 299 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 PTGR1Q14914 329 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 DLGAP5Q15398 846 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 DAB2IPQ5VWQ8 1189 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 ANKRD40Q6AI12 368 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 GPSM1Q86YR5 675 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 DDIASQ8IXT1 998 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 OR52N4Q8NGI2 321 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 MECRQ9BV79 373 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 STK33Q9BYT3 514 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 SPAG4Q9NPE6 437 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 IPO11Q9UI26 975 aaKnown RBP3.68□□□□□ -1.82
VPS50-216ENST00000484954 RAB21Q9UL25 225 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 SLC39A10Q9ULF5 831 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 CA14Q9ULX7 337 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 LAMP3Q9UQV4 416 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 CEP83Q9Y592 693 aa3.68□□□□□ -1.82
VPS50-216ENST00000484954 CXorf65A6NEN9 183 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 KIF28PB7ZC32 967 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 PRR23D1E9PI22 279 aaPredicted RBP3.67□□□□□ -1.82
VPS50-216ENST00000484954 RHODO00212 210 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 SGPL1O95470 568 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 SYF2O95926 243 aaKnown RBP3.67□□□□□ -1.82
VPS50-216ENST00000484954 PRR23D2P0DMB1 279 aaPredicted RBP3.67□□□□□ -1.82
VPS50-216ENST00000484954 HOXA11P31270 313 aaPredicted RBP3.67□□□□□ -1.82
VPS50-216ENST00000484954 ARRB2P32121 409 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 ALDH7A1P49419 539 aaKnown RBP3.67□□□□□ -1.82
VPS50-216ENST00000484954 AK2P54819 239 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 P2RX3P56373 397 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 RPL15P61313 204 aaKnown RBP3.67□□□□□ -1.82
VPS50-216ENST00000484954 CBFBQ13951 182 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 GLE1Q53GS7 698 aaKnown RBP3.67□□□□□ -1.82
VPS50-216ENST00000484954 DGKKQ5KSL6 1271 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 C6orf10Q5SRN2 563 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 HMBOX1Q6NT76 420 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 SLC39A5Q6ZMH5 540 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 OR1N1Q8NGS0 311 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 B4GALNT2Q8NHY0 566 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 CLEC4CQ8WTT0 213 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 IP6K1Q92551 441 aa3.67□□□□□ -1.82
VPS50-216ENST00000484954 INPP5DQ92835 1189 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms